Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_N03
(917 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0533 - 29818276-29818866 54 1e-07
09_04_0567 + 18585556-18586113 49 5e-06
07_01_0943 - 7959813-7960113,7960193-7960363,7960446-7961278,796... 32 0.56
09_06_0315 - 22246879-22247643,22247722-22247862,22248509-222485... 31 0.97
06_03_1348 - 29497084-29497384,29497464-29497634,29497717-294985... 31 1.7
03_04_0008 - 16274158-16274458,16274791-16275623,16275706-162761... 31 1.7
01_06_1389 - 36969414-36969436,36970027-36970394,36970474-369706... 30 2.2
10_05_0091 - 9085506-9085758,9085838-9085992,9086091-9086132,908... 30 3.0
08_01_0438 + 3852221-3853207,3853544-3854757,3855258-3855330,385... 29 3.9
04_03_0574 - 17338777-17339077,17339390-17340222,17340304-173407... 29 3.9
08_02_0778 + 21119812-21119941,21120030-21120463,21120576-211206... 29 5.2
06_03_0106 + 16702019-16702600 29 6.8
11_06_0576 - 25127807-25128107,25128241-25128357,25128730-251292... 28 9.0
08_02_0942 - 22845270-22845570,22845650-22845820,22845903-228467... 28 9.0
06_03_0588 + 22567820-22570802,22570917-22571269 28 9.0
04_03_0421 - 15725045-15725193,15725528-15725599,15725709-157257... 28 9.0
01_03_0214 + 13863123-13863593,13863671-13864132,13864308-138650... 28 9.0
>02_05_0533 - 29818276-29818866
Length = 196
Score = 54.4 bits (125), Expect = 1e-07
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 14/128 (10%)
Frame = +2
Query: 197 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIG--TDV--VERKV--VDGVLHTHRLV 358
M ++T EH + HPW+ V AAWRK+ +P + + DV + R+V G L R +
Sbjct: 1 MVVYTQEHVYRHPWDRVTAAAWRKFTDPASRTALSHVADVHTLHRRVDPEAGRLQAARSI 60
Query: 359 SSK-----WFFPRWAQALIGT---AKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDE 514
+ + + R A + A +C+ E S V+ +R M + N++ I V+E
Sbjct: 61 TVRSPPLPFILRRLLPAAASSPSGAALCHCVETSLVDAPRRAMDVVVRNVSLRGLIEVEE 120
Query: 515 TVRYTPHP 538
Y PHP
Sbjct: 121 RSTYRPHP 128
>09_04_0567 + 18585556-18586113
Length = 185
Score = 49.2 bits (112), Expect = 5e-06
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Frame = +2
Query: 206 WTSEHTFNHPWETVAQAAWRKYPNPMNPA-----VIGTDVVERKV--VDGVLHTHRLVSS 364
+T EH + HPW V AAWRK+ + A ++ + R+V G + R ++
Sbjct: 5 YTQEHVYRHPWHRVTAAAWRKFTDADARAAPLSHILEVHTLSRRVDAGSGRIDAVRAIAG 64
Query: 365 KW-FFPRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHP 538
+ P + L+ A + E + V+ R M + + N + V+ET Y PHP
Sbjct: 65 RAPPLPLLLRGLVAAADVVLCVEHTTVDGPARAMRVISRNANLRALVHVEETCSYRPHP 123
>07_01_0943 -
7959813-7960113,7960193-7960363,7960446-7961278,
7961360-7961821,7961899-7962606
Length = 824
Score = 32.3 bits (70), Expect = 0.56
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 383 WAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 541
+A+ I T K ++ + V P MTL T TF + D V+ TP PS
Sbjct: 432 YAKVFIDTVKDTWSGYLLPVPPNDEIMTLGDTRKTFIQWPKEDIVVKMTPRPS 484
>09_06_0315 -
22246879-22247643,22247722-22247862,22248509-22248561,
22248755-22248919,22249685-22249799,22249937-22250025,
22250578-22250608
Length = 452
Score = 31.5 bits (68), Expect = 0.97
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 242 TVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKW-FFPRW 385
TV++A P P++PAV ++ +VV + + + S W FF RW
Sbjct: 47 TVSKAEVLASPPPISPAVNAVIIIRNRVVLSIANIFSVAVSLWPFFVRW 95
>06_03_1348 -
29497084-29497384,29497464-29497634,29497717-29498549,
29498631-29499092,29499171-29499904,29499993-29500122
Length = 876
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 383 WAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 541
+A+ I T K ++ V P MTL TF + D V+ TPHPS
Sbjct: 484 YAKVSIDTVKDTWSGYPLPVPPNDEIMTLGDARKTFIQWPKEDIVVKMTPHPS 536
>03_04_0008 -
16274158-16274458,16274791-16275623,16275706-16276167,
16276245-16276882,16277068-16277197
Length = 787
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 383 WAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 541
+A+ I T K ++ V P MTL TF + D V+ TPHPS
Sbjct: 452 YAKVSIDTVKDTWSGYPLPVPPNDEIMTLGDARKTFIQWPKEDIVVKMTPHPS 504
>01_06_1389 -
36969414-36969436,36970027-36970394,36970474-36970644,
36970727-36971559,36971642-36972103,36972182-36972915,
36973004-36973133
Length = 906
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 380 RWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSE 544
R+A+ I T K ++ V P MTL TF + D V+ TP PS+
Sbjct: 483 RYAKVSIDTVKDTWSGYPLPVPPNDEIMTLGDARKTFIQWPKEDIVVKMTPRPSQ 537
>10_05_0091 -
9085506-9085758,9085838-9085992,9086091-9086132,
9086379-9086921,9087003-9087287,9087332-9087463,
9087542-9087729,9088186-9088240
Length = 550
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 380 RWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 541
R+A+ I T K ++ V P MTL TF + D V+ TP PS
Sbjct: 261 RYAKVSIDTVKDTWSGYPLPVPPNDELMTLGDARKTFIQWPKEDIVVKMTPRPS 314
>08_01_0438 +
3852221-3853207,3853544-3854757,3855258-3855330,
3856715-3856843,3857060-3857103,3857186-3857265,
3857342-3857396,3857712-3857919
Length = 929
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Frame = +2
Query: 359 SSKWFFPRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFC--HYIAV--DETVRY 526
S W F +W +A+ + E ++ L T+ TFC H + +E
Sbjct: 345 SFAWLFEKWLEAMPVGPPVSLVLEFNQEMAAAATKILPDTHCTFCEKHILGTVREELGSL 404
Query: 527 TPHPSEFLKNITKTRSCSHCTR 592
P P E IT R C C R
Sbjct: 405 YPEP-ELDHFITDLRKCIDCCR 425
>04_03_0574 -
17338777-17339077,17339390-17340222,17340304-17340765,
17340843-17341030,17341244-17341576,17341665-17341796,
17342604-17342643
Length = 762
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 380 RWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 541
R+A+ I T K ++ V P MTL TF + D V+ TP PS
Sbjct: 426 RYAKVSIDTVKDTWSGYPLPVPPNDEIMTLGDARKTFIQWPKEDIVVKMTPRPS 479
>08_02_0778 +
21119812-21119941,21120030-21120463,21120576-21120695,
21121356-21121898,21121988-21122172,21122255-21122425,
21122505-21122805
Length = 627
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 383 WAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 541
+A+ I T K ++S V P MTL TF + D V+ TP PS
Sbjct: 270 YAKVSIDTVKDTWSSYPLPVPPNDEIMTLGDARKTFIQWPKEDIVVKMTPRPS 322
>06_03_0106 + 16702019-16702600
Length = 193
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -2
Query: 304 CPYDGWIHRI-RIFSPCCLSNCFP 236
CP+ GW H + R+ SP +C P
Sbjct: 85 CPHHGWTHHLRRVISPPSSPDCMP 108
>11_06_0576 -
25127807-25128107,25128241-25128357,25128730-25129271,
25129353-25129814,25129893-25130626,25130715-25130742
Length = 727
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +2
Query: 380 RWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 541
R+A+ I T K ++ + P MTL TF + D V+ TP PS
Sbjct: 449 RYAKVSIDTVKDTWSGYPLPMPPNDEIMTLGDARKTFIQWPKEDIVVKMTPRPS 502
>08_02_0942 -
22845270-22845570,22845650-22845820,22845903-22846735,
22846817-22847278,22847357-22848090,22848179-22848308
Length = 876
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +2
Query: 383 WAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 541
+A+ I T K ++ V P + MTL TF + D V+ TP PS
Sbjct: 484 YAKVSIDTVKDTWSGYPLPVPPNDKIMTLGDARKTFIQWPKEDIVVKMTPRPS 536
>06_03_0588 + 22567820-22570802,22570917-22571269
Length = 1111
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -2
Query: 382 SWKKP--FGTDQSMSMKYTIYNFSFHNICPYDGWIHRIRIFS 263
SW P G +S++M Y YN+ NI P G++H + S
Sbjct: 478 SWLIPPGIGNLKSLNMLYMDYNYLTGNIPPTIGYLHNLVFLS 519
>04_03_0421 -
15725045-15725193,15725528-15725599,15725709-15725784,
15728607-15728679,15728919-15728983,15729423-15729681,
15729761-15729931,15730014-15730846,15731097-15731390,
15731469-15731939
Length = 820
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +2
Query: 380 RWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 541
R+A+ I T K ++ V P MTL TF + D V+ TP PS
Sbjct: 296 RYAKVSIDTVKDTWSGYPLPVPPNDEIMTLGDACKTFIQWPKEDIVVKMTPRPS 349
>01_03_0214 +
13863123-13863593,13863671-13864132,13864308-13865038,
13865121-13865291,13865371-13865629,13866069-13866158
Length = 727
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 383 WAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPS 541
+A+ I T K ++ V P MTL TF + D V+ TP PS
Sbjct: 321 YAKVSIDTVKDTWSGYPLPVPPNDEIMTLSDARKTFIQWPKEDIVVKMTPRPS 373
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,048,675
Number of Sequences: 37544
Number of extensions: 427446
Number of successful extensions: 915
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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