Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_N03
         (917 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81063-4|CAB02955.1|  209|Caenorhabditis elegans Hypothetical pr...   116   2e-26
Z66519-4|CAA91373.1|  210|Caenorhabditis elegans Hypothetical pr...    50   3e-06
U23513-4|AAP68947.1|  322|Caenorhabditis elegans Hypothetical pr...    31   0.87 
Z77661-2|CAB01184.4|  265|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p...    29   4.7  
Z69794-2|CAA93681.1|  786|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z47812-12|CAE48507.1|  719|Caenorhabditis elegans Hypothetical p...    28   8.1  
Z47812-11|CAA87796.1|  796|Caenorhabditis elegans Hypothetical p...    28   8.1  
Z47811-6|CAE48505.1|  719|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z47811-5|CAA87788.1|  796|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z81063-4|CAB02955.1|  209|Caenorhabditis elegans Hypothetical
           protein F15D3.6 protein.
          Length = 209

 Score =  116 bits (279), Expect = 2e-26
 Identities = 52/123 (42%), Positives = 79/123 (64%)
 Frame = +2

Query: 197 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFF 376
           M+IW+SEH F+H WETVAQAA+RKYPNP+N ++ G DVV++ +  G + T R++ S +  
Sbjct: 1   MRIWSSEHIFDHEWETVAQAAFRKYPNPLNRSITGIDVVKQTLEAGKILTERIIQSHFSI 60

Query: 377 PRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSEFLKN 556
           P WA  L G +   Y+ E + ++P +++ +L T NL    ++ VDE + YTP   +  K 
Sbjct: 61  PSWATKLTGFSGTQYSHEYTVIDPTRKEFSLTTRNLNGSSFLRVDEKLTYTPAHEDPNKT 120

Query: 557 ITK 565
           I K
Sbjct: 121 ILK 123



 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 610 YMEDLLTNKISLNAGKGRQAIEWVIGEVR 696
           Y E    +  S NA KGRQ +EWVI  ++
Sbjct: 138 YCEKTFLSIYSQNANKGRQGVEWVIDHLK 166


>Z66519-4|CAA91373.1|  210|Caenorhabditis elegans Hypothetical
           protein B0334.4 protein.
          Length = 210

 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
 Frame = +2

Query: 197 MKIWTSEHT-FNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWF 373
           MK+W S +T F + ++ VA A W +YPN     +I  DV+ER++ D  + T +L+  +  
Sbjct: 1   MKLWDSPNTSFPYSFDEVASAFWDRYPNSHAKHIISEDVLERQITDNTIVTKKLIVKQGS 60

Query: 374 -----FPRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRY 526
                 PRW   +    ++    E S  + + +++   T N++      + E   Y
Sbjct: 61  SILKRVPRWISRMT-DIQVVPVIEESVYDKVSKKLVTYTRNVSHISLFQLHERCIY 115


>U23513-4|AAP68947.1|  322|Caenorhabditis elegans Hypothetical
           protein D2021.2a protein.
          Length = 322

 Score = 31.5 bits (68), Expect = 0.87
 Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
 Frame = +2

Query: 368 WFFPRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSE- 544
           W+ P WAQ L   + +  A  +  +  +   +     N   CH + V+E      H  + 
Sbjct: 101 WYVPWWAQMLFVLSVLALAFTLFRIGTLDPGVVRAAKN---CHQLFVNEAEAGIQHQQKY 157

Query: 545 ----FLKNITKTRSCSHCTRCAS 601
               F++ +  T+ C+ C  C +
Sbjct: 158 CFTCFIRKMDHTKHCAVCGFCVN 180


>Z77661-2|CAB01184.4|  265|Caenorhabditis elegans Hypothetical
           protein F40G12.2 protein.
          Length = 265

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 11/48 (22%), Positives = 26/48 (54%)
 Frame = +2

Query: 719 SSACKSTDELLSQTKKSIDDIPTISXKIXGMISHLKQKSTLDDIEKFP 862
           ++ C      L +++++ + +  +S      + HLK K+T+ D+ K+P
Sbjct: 199 TNTCAIPPSFLVKSQENCEKVHFLSSNFWNCLQHLKSKNTIPDLIKYP 246


>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
           protein F45G2.2a protein.
          Length = 1235

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 401 GTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVR 523
           GT K    +E+ E+NP + + T   +NLTF +  +V   +R
Sbjct: 66  GTPKKLTRAEVQEINPAKFEKTEDMSNLTFLNEASVLHNLR 106


>Z69794-2|CAA93681.1|  786|Caenorhabditis elegans Hypothetical
           protein R03G8.4 protein.
          Length = 786

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 609 LHGRPFNQQNFSKCWQRKASYRMGYRGSSTL-KLRSLQVQPVKVQMNYYHK 758
           ++G+PF+ + F +CW  +  Y   Y  S    + R  QV+  ++    +H+
Sbjct: 465 INGKPFDIEEFGRCWTHQTGYPTVYVSSYYAGQTRLSQVKVKEIVTGDFHE 515


>Z47812-12|CAE48507.1|  719|Caenorhabditis elegans Hypothetical
           protein T05H10.7b protein.
          Length = 719

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +3

Query: 522 GILHI-LQNSSKTLLKQEAVVTVQGVPLX*LHGRPFNQQNFSKCWQRKASYRMGYRGS 692
           GI+H+   NSS   + Q ++  +    L  L G  F  Q + + W+++ +  +G+RG+
Sbjct: 275 GIIHLPFINSSGRPIGQVSIEYLCVRALTRLDGPQFMDQTYCRHWKKRNALEVGHRGA 332


>Z47812-11|CAA87796.1|  796|Caenorhabditis elegans Hypothetical
           protein T05H10.7a protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +3

Query: 522 GILHI-LQNSSKTLLKQEAVVTVQGVPLX*LHGRPFNQQNFSKCWQRKASYRMGYRGS 692
           GI+H+   NSS   + Q ++  +    L  L G  F  Q + + W+++ +  +G+RG+
Sbjct: 352 GIIHLPFINSSGRPIGQVSIEYLCVRALTRLDGPQFMDQTYCRHWKKRNALEVGHRGA 409


>Z47811-6|CAE48505.1|  719|Caenorhabditis elegans Hypothetical
           protein T05H10.7b protein.
          Length = 719

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +3

Query: 522 GILHI-LQNSSKTLLKQEAVVTVQGVPLX*LHGRPFNQQNFSKCWQRKASYRMGYRGS 692
           GI+H+   NSS   + Q ++  +    L  L G  F  Q + + W+++ +  +G+RG+
Sbjct: 275 GIIHLPFINSSGRPIGQVSIEYLCVRALTRLDGPQFMDQTYCRHWKKRNALEVGHRGA 332


>Z47811-5|CAA87788.1|  796|Caenorhabditis elegans Hypothetical
           protein T05H10.7a protein.
          Length = 796

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +3

Query: 522 GILHI-LQNSSKTLLKQEAVVTVQGVPLX*LHGRPFNQQNFSKCWQRKASYRMGYRGS 692
           GI+H+   NSS   + Q ++  +    L  L G  F  Q + + W+++ +  +G+RG+
Sbjct: 352 GIIHLPFINSSGRPIGQVSIEYLCVRALTRLDGPQFMDQTYCRHWKKRNALEVGHRGA 409


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,688,389
Number of Sequences: 27780
Number of extensions: 408428
Number of successful extensions: 984
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)