Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_N02
         (1297 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    33   0.014
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.22 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   6.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   8.4  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 33.5 bits (73), Expect = 0.014
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -2

Query: 345 GGXPXGKXPPPXPPXXXXGXPXGGGPPGXXPXXF 244
           GG P G   PP PP    G   GG P G  P  +
Sbjct: 288 GGMPSGMVGPPRPPMPMQGGAPGGPPQGMRPNFY 321



 Score = 25.4 bits (53), Expect = 3.6
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -1

Query: 322 PPPPAPXXGGGXXXXGGPPXGXPGXFF 242
           P PP P  GG     GGPP G    F+
Sbjct: 298 PRPPMPMQGGAP---GGPPQGMRPNFY 321


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 29.5 bits (63), Expect = 0.22
 Identities = 17/53 (32%), Positives = 17/53 (32%)
 Frame = -3

Query: 989 GGXXGGXXXXXXXXXXXXPPPXGGGGGXXXXXXXGXXXPXXFXXXXXGGGGGG 831
           GG  GG            P P GGGGG                    GGGGGG
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGG 256



 Score = 26.2 bits (55), Expect = 2.1
 Identities = 17/53 (32%), Positives = 17/53 (32%)
 Frame = -1

Query: 988 GGXXGGXXXXXXXXXXXXXPXXGGGGGXXXXXXXXXXXLXFXXXXXGGGGGGG 830
           GG  GG             P  GGGGG                   GGGGGGG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDRER-EGGGNGGGGGGG 256



 Score = 26.2 bits (55), Expect = 2.1
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3

Query: 255 GXPXGGPPXXXXPPPXXGAGGGG 323
           G P GG      P P  G GGGG
Sbjct: 210 GAPGGGGGSSGGPGPGGGGGGGG 232



 Score = 24.6 bits (51), Expect = 6.4
 Identities = 12/33 (36%), Positives = 12/33 (36%)
 Frame = -3

Query: 929 PXGGGGGXXXXXXXGXXXPXXFXXXXXGGGGGG 831
           P  GGGG       G            GGGGGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.1 bits (57), Expect = 1.2
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -3

Query: 320 PPPXPPXGXXXXXXGGAPXGXP 255
           PPP PP G       G P G P
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGP 606


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 6.4
 Identities = 12/34 (35%), Positives = 12/34 (35%)
 Frame = -2

Query: 930 PXXGGGGXXXFXXXGXXXXXXFXXXXXGGGGGGG 829
           P  GGGG       G            GGGGG G
Sbjct: 650 PGSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSG 683


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 8.4
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = -1

Query: 592 GGGGGGXXXXXFCFLFXXXXXXGGGGGG 509
           GGGG G     F          G GGGG
Sbjct: 816 GGGGAGASGGGFLITGDPSDTIGAGGGG 843


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 947,662
Number of Sequences: 2352
Number of extensions: 24310
Number of successful extensions: 753
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 149192655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)