Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_M23
         (887 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118478-1|AAM49847.1|  214|Drosophila melanogaster GM16226p pro...    35   0.13 
AE014134-2965|AAF53695.1|  214|Drosophila melanogaster CG10343-P...    35   0.13 
DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ domain-c...    31   2.1  
AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA...    31   2.1  

>AY118478-1|AAM49847.1|  214|Drosophila melanogaster GM16226p
           protein.
          Length = 214

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
 Frame = +2

Query: 239 LSRQAEEIEALKSIY---TEELTIDSEITRSYTIRIEENKKEVLLYVTLPEDYPSISP 403
           L +Q EE EAL+SIY   T    IDS +T  Y    E+N K  L+ +   E+YP  +P
Sbjct: 5   LEQQTEEREALQSIYEGDTNFKEIDS-VTFQYKYGEEDNYKSFLVELKWGENYPDEAP 61


>AE014134-2965|AAF53695.1|  214|Drosophila melanogaster CG10343-PA
           protein.
          Length = 214

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
 Frame = +2

Query: 239 LSRQAEEIEALKSIY---TEELTIDSEITRSYTIRIEENKKEVLLYVTLPEDYPSISP 403
           L +Q EE EAL+SIY   T    IDS +T  Y    E+N K  L+ +   E+YP  +P
Sbjct: 5   LEQQTEEREALQSIYEGDTNFKEIDS-VTFQYKYGEEDNYKSFLVELKWGENYPDEAP 61


>DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ
           domain-containing proteinBBG-LP10 protein.
          Length = 1842

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
 Frame = +2

Query: 218 LKMEVDNLSRQAEEIEALKSIYTEELTIDSEITRSYTIRIEENKKEVLLYVTLPED---Y 388
           +K+   +L  Q +EIEA+K ++ E   I      + T   ++  KEV++     ++    
Sbjct: 429 VKVTHQDLREQIQEIEAVKVVHKEVKVIKESAKVTTTTSHKQATKEVIISKEDHKNDSAL 488

Query: 389 PSISPPKFELSAPWMDRQTKTNLHK 463
           P++S  K E+ +P ++      LHK
Sbjct: 489 PAVSTTKVEIISPPLEDDLGYVLHK 513


>AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA
            protein.
          Length = 1552

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
 Frame = +2

Query: 218  LKMEVDNLSRQAEEIEALKSIYTEELTIDSEITRSYTIRIEENKKEVLLYVTLPED---Y 388
            +K+   +L  Q +EIEA+K ++ E   I      + T   ++  KEV++     ++    
Sbjct: 1224 VKVTHQDLREQIQEIEAVKVVHKEVKVIKESAKVTTTTSHKQATKEVIISKEDHKNDSAL 1283

Query: 389  PSISPPKFELSAPWMDRQTKTNLHK 463
            P++S  K E+ +P ++      LHK
Sbjct: 1284 PAVSTTKVEIISPPLEDDLGYVLHK 1308


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,142,398
Number of Sequences: 53049
Number of extensions: 540859
Number of successful extensions: 1644
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1642
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)