Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_M19
(956 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.13
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.13
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 34 0.13
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 33 0.30
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 33 0.30
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 33 0.30
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 33 0.30
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.30
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.53
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.53
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.53
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 0.92
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.6
AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical ... 31 1.6
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.1
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.1
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 2.8
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 29 3.7
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 29 3.7
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 29 3.7
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 29 3.7
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 3.7
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 3.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 4.9
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 4.9
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 4.9
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 4.9
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 4.9
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 25 5.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.5
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 6.5
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 6.5
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 29 6.5
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.5
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 6.5
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLPXIP 364
P PPPP + ++ PPPPPP PG +P +P
Sbjct: 285 PRPPPPPSSGMW------PPPPPPPPGRTPGPPGMPGMP 317
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLPXIP 364
P PPPP PPPPPP+ PG +P P
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3
Query: 474 PPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLPXIP 364
PPPP + F PPPPPP PG P P
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPP-GMRYPGGMPPPPPP 353
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLPXIP 364
P PPPP + ++ PPPPPP PG +P +P
Sbjct: 295 PRPPPPPSSGMW------PPPPPPPPGRTPGPPGMPGMP 327
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLPXIP 364
P PPPP PPPPPP+ PG +P P
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3
Query: 474 PPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLPXIP 364
PPPP + F PPPPPP PG P P
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPP-GMRYPGGMPPPPPP 363
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPPNSXXXP 391
P PPPP + A PPPPPP + P
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPPPTLKAP 98
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 489 PKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXP 391
P P PPPP L PPPPPP P
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPPTLKAPP 99
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -3
Query: 486 KNPXPPPPXAXFLFTXAXXXPPPPPP 409
K PPPP L + PPPPPP
Sbjct: 64 KATPPPPPPPPPLISILQQAPPPPPP 89
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 33.1 bits (72), Expect = 0.30
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 486 KNPXPPPPXAXFLFTXAXXXPPPPPP 409
K+P PPPP + PPPPPP
Sbjct: 487 KSPPPPPPLPPIATPSSVPPPPPPPP 512
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = -3
Query: 582 TPPXXXXTXXPPXXEXKXLXHXXXXGGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPP 409
TPP PP P P P PP A T + PPPPPP
Sbjct: 458 TPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIA----TPSSVPPPPPPP 511
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = -3
Query: 585 GTPPXXXXTXXPPXXEXKXLXHXXXXGGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPPN 406
GTP PP P P PPP + A PPPPPP+
Sbjct: 599 GTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPS 658
Query: 405 SXXXP 391
P
Sbjct: 659 GAGGP 663
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = -3
Query: 480 PXPPPPXAXF----LFTXAXXXPPPPPPNSXXXPGXXNLPXIP 364
P PPPP F + + A PPPPPP G P P
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPP 653
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 474 PPPPXAXFLFTXAXXXPPPPPPNS 403
PPPP A PPPPPP+S
Sbjct: 558 PPPPTRVESHGLAPARPPPPPPSS 581
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = -3
Query: 585 GTPPXXXXTXXPPXXEXKXLXHXXXXGGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPPN 406
GTP PP P P PPP + A PPPPPP+
Sbjct: 425 GTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPS 484
Query: 405 SXXXP 391
P
Sbjct: 485 GAGGP 489
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = -3
Query: 480 PXPPPPXAXF----LFTXAXXXPPPPPPNSXXXPGXXNLPXIP 364
P PPPP F + + A PPPPPP G P P
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPP 479
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 474 PPPPXAXFLFTXAXXXPPPPPPNS 403
PPPP A PPPPPP+S
Sbjct: 384 PPPPTRVESHGLAPARPPPPPPSS 407
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 33.1 bits (72), Expect = 0.30
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 486 KNPXPPPPXAXFLFTXAXXXPPPPPP 409
K+P PPPP + PPPPPP
Sbjct: 494 KSPPPPPPLPPIATPSSVPPPPPPPP 519
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = -3
Query: 582 TPPXXXXTXXPPXXEXKXLXHXXXXGGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPP 409
TPP PP P P P PP A PPPPPP
Sbjct: 465 TPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPP 522
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -3
Query: 489 PKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLPXIP 364
P P PPPP T PPPPPP P LP P
Sbjct: 1338 PPPPPPPPPPPSDDLTPV-PPPPPPPPTMSKAPTGVPLPVPP 1378
Score = 31.5 bits (68), Expect = 0.92
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPP 409
P PPPP LF+ + PPPPPP
Sbjct: 1375 PVPPPPP---LFSPSMILPPPPPP 1395
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 501 RXXXPKNPXPPPPXAXFLFTXAXXXPPPPPP 409
R P P PPPP PPPPPP
Sbjct: 1332 RSSSPSPPPPPPPPPPPSDDLTPVPPPPPPP 1362
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 507 GGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXP 391
GG P PPPP PPPPPP P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLP 373
P PPPP F PPPPPP P +P
Sbjct: 771 PPPPPPPGGF-----KGGPPPPPPPGMFAPMAPVIP 801
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 507 GGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXP 391
GG P PPPP PPPPPP P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLP 373
P PPPP F PPPPPP P +P
Sbjct: 771 PPPPPPPGGF-----KGGPPPPPPPGMFAPMAPVIP 801
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 507 GGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXP 391
GG P PPPP PPPPPP P
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLP 373
P PPPP F PPPPPP P +P
Sbjct: 354 PPPPPPPGGF-----KGGPPPPPPPGMFAPMAPVIP 384
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.5 bits (68), Expect = 0.92
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPP 409
P PPPP + A PPPPPP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPP 584
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPP 409
P PPPP + PPPPPP
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPP 582
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPPNSXXXP 391
P PPPP L PPPPPP P
Sbjct: 576 PPPPPPPPPML---GGPPPPPPPPGGLMGP 602
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Frame = -3
Query: 474 PPPPXAXFLF---TXAXXXPPPPPPNSXXXPGXXNLPXIP 364
PPPP A L T PPPPPP G P P
Sbjct: 543 PPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPP 582
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLPXIPL 361
P PP P L T A PPPPPP G P +PL
Sbjct: 521 PPPPMPGMAPLSTGAPT-PPPPPPVGMANGGPPPPPPLPL 559
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3
Query: 474 PPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLPXIP 364
PPPP + A PPPPPP P N P P
Sbjct: 488 PPPPPMPSINGHAPN-PPPPPPLLGIAPMSTNAPPPP 523
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLPXIP 364
P PPPP PPPPP P P P
Sbjct: 501 PNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPP 539
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 483 NPXPPPPXAXFLFTXAXXXPPPPPP 409
NP PPPP PPPP P
Sbjct: 502 NPPPPPPLLGIAPMSTNAPPPPPMP 526
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 489 PKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXP 391
P P PPP A F PPPPPP P
Sbjct: 52 PVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPP 84
>AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical
protein C30F8.3 protein.
Length = 328
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPP 409
P PPPP F PPPPPP
Sbjct: 56 PVPPPPAYPFAPQVFTQPPPPPPP 79
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPP 409
P PPPP + PPPPPP
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPPPP 178
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPP 409
P PPPP + PPPPPP
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPPPP 178
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = -2
Query: 586 GNPPXPXXNXXSPPX*XEXPXPXXXXXRPXXXTQKPXTPPPXXXFP 449
G+PP P PP P P P P PPP P
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -3
Query: 504 GRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLP 373
G P PPPP A PPPPP P +LP
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 313
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 507 GGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXP 391
G R P PPPP A PPPPP + P
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 265
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 474 PPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLPXIP 364
PPPP A PPPPP S P P P
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = -3
Query: 552 PPXXEXKXLXHXXXXGGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLP 373
PP K G P PPPP PPPPP P P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 372 XIP 364
P
Sbjct: 298 PPP 300
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = -2
Query: 586 GNPPXPXXNXXSPPX*XEXPXPXXXXXRPXXXTQKPXTPPPXXXFP 449
G+PP P PP P P P P PPP P
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -3
Query: 504 GRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLP 373
G P PPPP A PPPPP P +LP
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 334
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 507 GGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXP 391
G R P PPPP A PPPPP + P
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 286
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 474 PPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLPXIP 364
PPPP A PPPPP S P P P
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = -3
Query: 552 PPXXEXKXLXHXXXXGGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLP 373
PP K G P PPPP PPPPP P P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 372 XIP 364
P
Sbjct: 319 PPP 321
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = -2
Query: 586 GNPPXPXXNXXSPPX*XEXPXPXXXXXRPXXXTQKPXTPPPXXXFP 449
G+PP P PP P P P P PPP P
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -3
Query: 504 GRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLP 373
G P PPPP A PPPPP P +LP
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 319
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 507 GGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXP 391
G R P PPPP A PPPPP + P
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPP 271
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 474 PPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLPXIP 364
PPPP A PPPPP S P P P
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = -3
Query: 552 PPXXEXKXLXHXXXXGGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXPGXXNLP 373
PP K G P PPPP PPPPP P P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 372 XIP 364
P
Sbjct: 304 PPP 306
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 474 PPPPXAXFLFTXAXXXPPPPPP 409
PPPP + + A PPPPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 474 PPPPXAXFLFTXAXXXPPPPPP 409
PPPP + + A PPPPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPP 816
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -3
Query: 489 PKNPX--PPPPXAXFLFTXAXXXPPPPPPNS 403
P++P PPPP + L A PPPPPP S
Sbjct: 8 PRSPLDLPPPPASVVLHPSAP--PPPPPPLS 36
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -3
Query: 489 PKNPX--PPPPXAXFLFTXAXXXPPPPPPNS 403
P++P PPPP + L A PPPPPP S
Sbjct: 8 PRSPLDLPPPPASVVLHPSAP--PPPPPPLS 36
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -3
Query: 489 PKNPX--PPPPXAXFLFTXAXXXPPPPPPNS 403
P++P PPPP + L A PPPPPP S
Sbjct: 8 PRSPLDLPPPPASVVLHPSAP--PPPPPPLS 36
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -3
Query: 489 PKNPX--PPPPXAXFLFTXAXXXPPPPPPNS 403
P++P PPPP + L A PPPPPP S
Sbjct: 8 PRSPLDLPPPPASVVLHPSAP--PPPPPPLS 36
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 507 GGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPP 412
GG P PPPP L + PPPPP
Sbjct: 667 GGLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 507 GGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPP 412
GG P PPPP L + PPPPP
Sbjct: 667 GGLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPP 412
P PPPP A PPPPP
Sbjct: 216 PAPPPPIGGIAPVNAHGAPPPPP 238
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 507 GGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPP 409
GG + PPPP + A PPPPPP
Sbjct: 223 GGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 255
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -3
Query: 486 KNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXP 391
++P PPP A PPPPPP P
Sbjct: 71 ESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRP 102
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -3
Query: 486 KNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXP 391
++P PPP A PPPPPP P
Sbjct: 293 ESPPLPPPPLPLSNPPAKPTPPPPPPKPTIRP 324
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPP 412
P PPPP A PPPPP
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPP 224
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 507 GGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPP 409
GG + PPPP + A PPPPPP
Sbjct: 209 GGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPP 412
P PPPP A PPPPP
Sbjct: 202 PAPPPPIGGIAPVNAHGAPPPPP 224
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 507 GGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPP 409
GG + PPPP + A PPPPPP
Sbjct: 209 GGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPPP 241
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 24.6 bits (51), Expect(2) = 5.5
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 426 PPPPPPNSXXXPGXXN 379
PPPPPP S G N
Sbjct: 536 PPPPPPRSSGANGNRN 551
Score = 22.6 bits (46), Expect(2) = 5.5
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = -3
Query: 480 PXPPPPXAXFLFTXAXXXPPPPPP 409
P PP + PPPPPP
Sbjct: 517 PMKPPSSSGSGSNRRSGPPPPPPP 540
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/61 (27%), Positives = 19/61 (31%)
Frame = -3
Query: 903 PPPPGXXKXXXPXPLXXXNPXPXFPQXGXVXVXXXGXPNGXFSXPEXPPXXXXTXXXXSP 724
PPPPG P P+ P P G + P F P PP P
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIP-----PPPPMFGAPPPPPPPSGLGVAPQP 129
Query: 723 P 721
P
Sbjct: 130 P 130
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -3
Query: 534 KXLXHXXXXGGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXP 391
K + GG P PPPP A L PPPPP P
Sbjct: 753 KEMAENGMRGGPVGVGVPPPPPPPSAIPLPPRLQGGIPPPPPLGIIPP 800
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 486 KNPXPPPPXAXFLFTXAXXXPPPPPPNS 403
+ P PPPP + PPPP P+S
Sbjct: 130 QQPPPPPPPPHYPPPPPHYPPPPPAPHS 157
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 28.7 bits (61), Expect = 6.5
Identities = 20/67 (29%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = -2
Query: 901 PPPRXXXXGXPXSPXXXKPXPKXSPKXXSFXXTXGXPKRXFFXXXXPPPNXXNXXGXFP- 725
P P+ P S KP PK PK F PK P P + FP
Sbjct: 2 PEPKSKPTPKPKSEPFPKPMPKSKPKSEPFPSPMPFPKPMPKPKPKPKPMPKHKPKPFPK 61
Query: 724 PXLKXXP 704
P L P
Sbjct: 62 PMLFPKP 68
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 489 PKNPXPPPPXAXFLFTXAXXXPPPPPP 409
P P PPPP F PPPPP
Sbjct: 41 PPLPCPPPPICPPQFCPPPPMCPPPPP 67
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -3
Query: 534 KXLXHXXXXGGRXXXPKNPXPPPPXAXFLFTXAXXXPPPPPPNSXXXP 391
K + GG P PPPP A L PPPPP P
Sbjct: 753 KEMAENGMRGGPVGVGVPPPPPPPSAIPLPPRLQGGIPPPPPLGIIPP 800
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,962,275
Number of Sequences: 27780
Number of extensions: 191801
Number of successful extensions: 1692
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2486134266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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