Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_M16
(889 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0330 - 16446685-16446776,16446968-16447119,16447172-164472... 93 2e-19
01_01_0009 + 57658-60086,60855-60935,61094-61295,61385-61905,619... 93 4e-19
06_01_0608 - 4399252-4399894,4401640-4402427 33 0.40
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 31 1.2
03_06_0495 + 34323082-34323173,34323600-34323742,34324265-343243... 30 2.1
12_02_0285 - 16828173-16828661 30 2.8
12_02_0284 - 16791153-16791212,16791392-16791925,16792266-167926... 30 2.8
07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660 29 4.9
01_06_0430 + 29299970-29300031,29300162-29300294,29301057-293011... 29 4.9
12_01_0468 + 3661177-3661626 28 8.6
>11_04_0330 -
16446685-16446776,16446968-16447119,16447172-16447281,
16447518-16447619,16447705-16447854,16448195-16448350,
16448552-16448713,16449549-16449638,16450152-16450271,
16451323-16451418,16451502-16451638,16453400-16453622
Length = 529
Score = 93.5 bits (222), Expect = 2e-19
Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Frame = +1
Query: 187 KKSK-VLLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDEEDVKEAVNALRKLAIED 363
K SK ++LDIEGTTT ISFV D +FPYA +NV+ L + + ++ KE + LR ED
Sbjct: 273 KSSKHCVVLDIEGTTTPISFVTDVMFPYARDNVRKHLTSTYSSDETKEDIKLLRIQVEED 332
Query: 364 QEKSVEGLVTIPGEDASKEDQIEGLVKNVKWQMSSDRKVAPLKATPG 504
+ + G V IP +DA KE+ I LV NV+ + +DRK+ LK G
Sbjct: 333 LKNGIVGSVPIPPDDADKEEVINALVANVESMIKADRKITSLKQLQG 379
Score = 79.8 bits (188), Expect = 3e-15
Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 12/109 (11%)
Frame = +3
Query: 501 RGLIWKKGYDKGDIKGHVYDDVLPALEQWRSVEGQKIYIYSSGSVQAQKLLFGQSSAGDX 680
+G IW+ G++ +++G V+DDV AL+ W + G K+YIYSSGS +AQ+LLFG ++ GD
Sbjct: 378 QGHIWRTGFESKELQGVVFDDVPEALKHWHA-SGMKVYIYSSGSREAQRLLFGNTAYGDL 436
Query: 681 LPLIDGHFDTAVGA-----------KQEATSYTAIVEKIGC-KPEEILF 791
+ G FDT G K+E SY I + +G P +ILF
Sbjct: 437 RQYLCGFFDTTTGEIMIPSRINRSNKRETRSYFEISQSLGVDSPAQILF 485
>01_01_0009 + 57658-60086,60855-60935,61094-61295,61385-61905,
61996-62114,62248-62345
Length = 1149
Score = 92.7 bits (220), Expect = 4e-19
Identities = 45/99 (45%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Frame = +3
Query: 501 RGLIWKKGYDKGDIKGHVYDDVLPALEQWRSVEGQKIYIYSSGSVQAQKLLFGQSSA-GD 677
+G IW++G+D G+++ VYDD AL +WR+ K YIYSSGS +AQ+L+F ++A GD
Sbjct: 1009 QGRIWRRGFDSGELRSEVYDDAADALRRWRA----KAYIYSSGSREAQRLIFANTAAHGD 1064
Query: 678 XLPLIDGHFDTAVGAKQEATSYTAIVEKIGC-KPEEILF 791
+ G FDT +GAK+E +SY I + +G +P +ILF
Sbjct: 1065 LRDHLCGFFDTTIGAKREVSSYYEIWQTLGTDRPSQILF 1103
Score = 77.4 bits (182), Expect = 1e-14
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Frame = +1
Query: 151 MAKENTVIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQW-DEEDVKE 327
MA ++ + D+ +V+L DIEGTTT ISFV D LFPYA +NV+ L A + E+ +
Sbjct: 891 MAMASSELPDLSAIQRVVL-DIEGTTTPISFVADVLFPYARDNVRRHLAATYGSSEETRA 949
Query: 328 AVNALRKLAIEDQEKSVEGLVTIPGEDASKEDQ---IEGLVKNVKWQMSSDRKVAPLKAT 498
V LR ED + V+G V +P DA E + +E L NV+ + +DRKV LK
Sbjct: 950 DVALLRAQVEEDLAQGVDGAVAVP-PDAEGEGEGAVVEALAANVESMIRADRKVTALKQL 1008
Query: 499 PG 504
G
Sbjct: 1009 QG 1010
>06_01_0608 - 4399252-4399894,4401640-4402427
Length = 476
Score = 32.7 bits (71), Expect = 0.40
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +1
Query: 262 PYAEENVKDFLDAQWDEEDVKEAVNA---LRKLAIEDQEKSVEGLVT 393
PY E++++ LD + DEEDV+ + +A L K+ +E + L+T
Sbjct: 371 PYTEDDIRKILDIRCDEEDVEMSADAKVLLTKIGVETSLRYAIHLIT 417
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 31.1 bits (67), Expect = 1.2
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 2/121 (1%)
Frame = +1
Query: 175 GDIVKKSKVLLLDIEGTTTSISFVKD--KLFPYAEENVKDFLDAQWDEEDVKEAVNALRK 348
G I ++ K L++D +F +D ++F N + L + E VKE K
Sbjct: 238 GFIYRRLKCLIIDEADRLLEQNFEEDMKQIFKRLPLNRQTVLFSATQTEQVKE----FAK 293
Query: 349 LAIEDQEKSVEGLVTIPGEDASKEDQIEGLVKNVKWQMSSDRKVAPLKATPGGLSGKKVM 528
L+ E E+S V + +DA +EGL + + S R+ L A KKVM
Sbjct: 294 LSFEKNEESTSKPVYVGVDDAETNATVEGLQQGY-CVIDSARRFLVLYAFLKKKQNKKVM 352
Query: 529 I 531
+
Sbjct: 353 V 353
>03_06_0495 +
34323082-34323173,34323600-34323742,34324265-34324315,
34324405-34324626,34324731-34324833,34325156-34325552,
34326564-34326735,34326995-34327089,34327246-34327455
Length = 494
Score = 30.3 bits (65), Expect = 2.1
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Frame = +1
Query: 139 GSVEMAKENT-----VIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQ 303
G +E+A++NT V+ D K VL IEG +T + D L + EE + +D+
Sbjct: 251 GLLELARDNTSGAGNVLPDQDKLKDVLKSRIEGISTMDA---DDLSAHREE--RQLVDSL 305
Query: 304 WDEEDVKEAVNALRKLAIEDQEKSVEGLVTIPGEDASKE 420
W KE N L +EK GLV +PGEDA ++
Sbjct: 306 W-----KECYNEPSSL----REK---GLVVLPGEDAPQQ 332
>12_02_0285 - 16828173-16828661
Length = 162
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 376 VEGLVTIPGEDASKEDQIEGLVKNVKWQMSSDRKVAPLKAT 498
VEG VT+P E + K +MS+ RKV P +AT
Sbjct: 12 VEGYVTMPREGTAASADARAWRKGQPEEMSTRRKVRPARAT 52
>12_02_0284 -
16791153-16791212,16791392-16791925,16792266-16792637,
16793754-16794105,16794107-16794795,16821179-16821574
Length = 800
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 376 VEGLVTIPGEDASKEDQIEGLVKNVKWQMSSDRKVAPLKAT 498
VEG VT+P E + K +MS+ RKV P +AT
Sbjct: 12 VEGYVTMPREGTAASADARAWRKGQPEEMSTRRKVRPARAT 52
>07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660
Length = 1369
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +1
Query: 172 IGDIVKKSKVLLLDIEGTT---TSISFVKDKLFPYAEE-NVKDFLD-AQWDEEDVKEAVN 336
+G++ + K+ L + T + D +FPY EE + + QW E + K +
Sbjct: 1034 LGELPRLKKLSLFGLSSITHINDQVYGTNDVIFPYLEELHFSELFSWEQWSEAEYKLLIP 1093
Query: 337 ALRKLAI 357
LRKL I
Sbjct: 1094 HLRKLGI 1100
>01_06_0430 +
29299970-29300031,29300162-29300294,29301057-29301160,
29302201-29302372,29302488-29302628,29302707-29303055,
29303133-29305477
Length = 1101
Score = 29.1 bits (62), Expect = 4.9
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +3
Query: 492 SNSRGLIWKKGYDKGDIKGHVYDDVLPALEQWRSVEGQKIYIYSSGSVQAQKLLFGQSSA 671
S+SRG + + + I G V DV +E S+ +K Y+ SSGS K + +SS
Sbjct: 677 SHSRGSDFSESREN-IISGKVVHDVNENIEDHVSMS-RKNYLNSSGSNAFNKERYSESSP 734
Query: 672 GDXLPLIDGHFD 707
+DG D
Sbjct: 735 RSDYSWVDGELD 746
>12_01_0468 + 3661177-3661626
Length = 149
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/61 (26%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +1
Query: 271 EENVKDFLDAQWDEEDVKEAVNALRKLAIEDQEKSVEGLVTIPGEDASKEDQ-IEGLVKN 447
EE V++ D + +EE V+E + + ++++E+ + V GE+ ++E Q +G+V++
Sbjct: 71 EEEVEEEEDIE-EEEVVEEEEEEIEEEEVKEEEEELREQVQEAGEEVNEEQQGADGVVQS 129
Query: 448 V 450
+
Sbjct: 130 M 130
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,625,017
Number of Sequences: 37544
Number of extensions: 491943
Number of successful extensions: 1257
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1252
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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