Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_M16
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75954-7|CAB00106.2| 492|Caenorhabditis elegans Hypothetical pr... 111 6e-25
AL132904-19|CAD91707.1| 371|Caenorhabditis elegans Hypothetical... 33 0.27
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 31 0.83
AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical ... 30 2.5
AF039046-1|AAB94210.1| 458|Caenorhabditis elegans F-box a prote... 29 3.4
U41545-4|AAK39134.1| 665|Caenorhabditis elegans Temporarily ass... 29 4.4
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 29 4.4
AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical ... 29 5.9
Z75535-3|CAH04733.1| 495|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z75535-2|CAA99826.1| 500|Caenorhabditis elegans Hypothetical pr... 28 7.8
U64852-2|ABH03524.1| 975|Caenorhabditis elegans Uncoordinated p... 28 7.8
U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated p... 28 7.8
AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein. 28 7.8
>Z75954-7|CAB00106.2| 492|Caenorhabditis elegans Hypothetical
protein F58H1.3a protein.
Length = 492
Score = 111 bits (267), Expect = 6e-25
Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 2/104 (1%)
Frame = +3
Query: 486 PESNSRGLIWKKGYDKGDIKGHVYDDVLPALEQWRSVEGQKI--YIYSSGSVQAQKLLFG 659
P +GLIW++ Y +GD+KGHVY DVLP L + VE +KI YIYSSGSV AQKLLF
Sbjct: 101 PMKALQGLIWEEAYQRGDVKGHVYPDVLPVL---KIVENRKIPIYIYSSGSVHAQKLLFA 157
Query: 660 QSSAGDXLPLIDGHFDTAVGAKQEATSYTAIVEKIGCKPEEILF 791
S GD ++ G+FDT +G K E+ SYT I E+I P EILF
Sbjct: 158 NSIEGDMTKILYGYFDTNIGLKGESNSYTKISERIKIPPSEILF 201
Score = 79.0 bits (186), Expect = 4e-15
Identities = 45/101 (44%), Positives = 63/101 (62%)
Frame = +1
Query: 202 LLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDEEDVKEAVNALRKLAIEDQEKSVE 381
LLLDIEGT TSISFVKD+LFPYA ENV ++L+ +D + V LR +A + E V
Sbjct: 11 LLLDIEGTITSISFVKDELFPYAFENVGNYLEEHYDNPATQIIVEDLRHIADQQAENDV- 69
Query: 382 GLVTIPGEDASKEDQIEGLVKNVKWQMSSDRKVAPLKATPG 504
+V I +++ IE + KNV+ + D+K+ P+KA G
Sbjct: 70 AVVRI---REPRKECIEDVTKNVRHWIKRDKKLTPMKALQG 107
>AL132904-19|CAD91707.1| 371|Caenorhabditis elegans Hypothetical
protein Y111B2A.26 protein.
Length = 371
Score = 33.1 bits (72), Expect = 0.27
Identities = 22/103 (21%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +1
Query: 244 VKDKLFPYAEENVKDFLDAQWDEEDVKEAVNALRKLAIEDQEKSVEGLVTIPGEDASKED 423
+++ L E + ++ ++A+ E +++ V L + +E + E + AS
Sbjct: 43 LREHLMIVEETSTREAVEAEQRETELRARVRELETKGHQVEEGASESTQQYQVQIASLTS 102
Query: 424 QIEGLV-KNVKWQMSSDRKVAPLKATPGGLSGKKVMIRETSRD 549
Q+E L K +W+ + +V+ + T L+ + ++RE S D
Sbjct: 103 QVESLQNKTTEWKKKFETEVSARQQTQEALTSLQNVVRELSID 145
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 31.5 bits (68), Expect = 0.83
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 361 DQEKSVEGLVTIPGEDASKEDQIEGLVKNVKWQMSSDRKVAPLK 492
D EK + +D +ED+++ + ++ Q SSD+KV+ K
Sbjct: 100 DDEKPASSSSKLAADDDDEEDELDAFMAGIEKQASSDKKVSEQK 143
>AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical
protein Y56A3A.4 protein.
Length = 342
Score = 29.9 bits (64), Expect = 2.5
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 175 GDIVKKSKV--LLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDEEDVKEAVNALRK 348
G I++KSK+ L+ I TT VKD L YA++ V +D +E V +
Sbjct: 226 GSIMEKSKLDDLMQQISSTTVLEENVKDVLVEYADDFVSSLIDKACKMIKNRE-VKKIES 284
Query: 349 LAIEDQEKSVEGLVTIP 399
IE K+V + +P
Sbjct: 285 RDIEFILKNVYNMPVVP 301
>AF039046-1|AAB94210.1| 458|Caenorhabditis elegans F-box a protein
protein 195 protein.
Length = 458
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +1
Query: 274 ENVKDFLDAQWDEEDVKEAVNALRKLAIEDQEK----SVEGLVTIP 399
+NVK LD W EE++ AV A + ED+E+ EG+ +P
Sbjct: 377 KNVKVHLDDDWHEEELVGAVGAEEEEDEEDEEEEDEDEEEGMADVP 422
>U41545-4|AAK39134.1| 665|Caenorhabditis elegans Temporarily
assigned gene nameprotein 52 protein.
Length = 665
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Frame = +1
Query: 187 KKSKVLLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDEEDVKEAVNALRKLAIEDQ 366
K ++ D+ G + + + K P EE+ DFL QW + + +ED+
Sbjct: 386 KLRNMITADMTGNISRV-LTRKKPAPKLEES--DFLRGQWTTSTIASNQRKRKVATLEDE 442
Query: 367 EKSVEGLVTIPGEDASKEDQI--EGLVKNVKWQMS 465
E+ V +++ P K E V W S
Sbjct: 443 EEDVFNMLSSPNLSQRKRKATLQENTPSGVGWTAS 477
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +1
Query: 265 YAEENVKDFLDAQWDEEDVKEAVNALRKLAIEDQEKSVEGLVTIPGEDASKE-DQIEGLV 441
++EE + ++Q E +K +RK+ IED EK ++ + + A+ E + +
Sbjct: 382 FSEEMERIRTESQTTSESLKYEHELVRKMMIEDMEKLEAEVLALKSQQANLEIQEFHDKI 441
Query: 442 KNVKW--QMSSDRK 477
K ++ Q+SS+ K
Sbjct: 442 KQLELEVQLSSENK 455
>AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical
protein Y39F10A.3 protein.
Length = 309
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 618 YSSGSVQAQKLLFGQSSAGDXLPLIDG 698
YS+G V +K + GQ S+ D PL+ G
Sbjct: 78 YSTGQVTTRKSVLGQVSSADQFPLLYG 104
>Z75535-3|CAH04733.1| 495|Caenorhabditis elegans Hypothetical
protein F14B4.2b protein.
Length = 495
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +1
Query: 208 LDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDEEDVKEAVNALRKLAIEDQEKSVEGL 387
+D G T + + + ++ DFL +WDE +E++N + L EK + G+
Sbjct: 261 VDEHGVTPEEMIINTEWGAFGDDGALDFLRTEWDEVVDRESINPGQHL----YEKMISGM 316
>Z75535-2|CAA99826.1| 500|Caenorhabditis elegans Hypothetical
protein F14B4.2a protein.
Length = 500
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +1
Query: 208 LDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDEEDVKEAVNALRKLAIEDQEKSVEGL 387
+D G T + + + ++ DFL +WDE +E++N + L EK + G+
Sbjct: 266 VDEHGVTPEEMIINTEWGAFGDDGALDFLRTEWDEVVDRESINPGQHL----YEKMISGM 321
>U64852-2|ABH03524.1| 975|Caenorhabditis elegans Uncoordinated
protein 83, isoform b protein.
Length = 975
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 271 EENVKDFLDAQWDEEDVKEAVNALRKLAIEDQEKSVEGLVTIPGEDASKEDQIEGLVKNV 450
EE+ D D E V + + A + E ++G VT+ +S EDQ+ N
Sbjct: 201 EESEADEEDRHSQTETVVTEDDNVLPFAENEYESIMDGRVTVDSCTSSSEDQMVEQSTNK 260
Query: 451 KWQ 459
KW+
Sbjct: 261 KWE 263
>U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated
protein 83, isoform a protein.
Length = 1041
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 271 EENVKDFLDAQWDEEDVKEAVNALRKLAIEDQEKSVEGLVTIPGEDASKEDQIEGLVKNV 450
EE+ D D E V + + A + E ++G VT+ +S EDQ+ N
Sbjct: 267 EESEADEEDRHSQTETVVTEDDNVLPFAENEYESIMDGRVTVDSCTSSSEDQMVEQSTNK 326
Query: 451 KWQ 459
KW+
Sbjct: 327 KWE 329
>AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein.
Length = 1041
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +1
Query: 271 EENVKDFLDAQWDEEDVKEAVNALRKLAIEDQEKSVEGLVTIPGEDASKEDQIEGLVKNV 450
EE+ D D E V + + A + E ++G VT+ +S EDQ+ N
Sbjct: 267 EESEADEEDRHSQTETVVTEDDNVLPFAENEYESIMDGRVTVDSCTSSSEDQMVEQSTNK 326
Query: 451 KWQ 459
KW+
Sbjct: 327 KWE 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,326,870
Number of Sequences: 27780
Number of extensions: 420802
Number of successful extensions: 1193
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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