Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_M14
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00046-10|AAC47049.3|  958|Caenorhabditis elegans Hypothetical p...    58   8e-09
AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl cyc...    31   1.4  

>U00046-10|AAC47049.3|  958|Caenorhabditis elegans Hypothetical
           protein R13F6.10 protein.
          Length = 958

 Score = 58.0 bits (134), Expect = 8e-09
 Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +2

Query: 158 VVERRLRPVYDWLDNGYNKKALQEAEKVLKKSPSXXXXXXXXXXXXXXXXXXQEAGAVLD 337
           V+ERRLRP+YD LD+   KKAL + +KVLKK P+                   +A  +L+
Sbjct: 8   VLERRLRPIYDSLDSQQFKKALSDCDKVLKKHPNTSAAKVLKALTLIRLEKLADATEILE 67

Query: 338 AL-VEEKPSDDTTLQAMTMSFRESQQ 412
           AL V     D+ TLQA    +R+S Q
Sbjct: 68  ALDVPGAHHDELTLQAFVHCYRDSNQ 93


>AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl
           cyclase protein 19 protein.
          Length = 1143

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -1

Query: 249 FFNTFSASCKAFLLYPLSSQSYTGRNRRSTTPPSCTCCDLNAIFHL 112
           + NTF+ +C A ++ P  S +       ST+PPS     L+ +F+L
Sbjct: 296 YLNTFTMNCGAVVVNPPVSCATPACINASTSPPSAFARSLHDVFYL 341


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,702,689
Number of Sequences: 27780
Number of extensions: 285239
Number of successful extensions: 634
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)