Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_M13
(856 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0385 - 24858580-24858721,24858772-24858850,24859155-248593... 81 1e-15
01_06_0756 - 31731607-31731752,31732368-31732467,31732716-317329... 74 1e-13
02_04_0575 - 24000191-24000302,24000710-24000788,24001017-240011... 73 4e-13
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 67 1e-11
03_05_0049 - 20277234-20277251,20277670-20277795,20278085-202781... 66 4e-11
12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680... 64 2e-10
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 63 2e-10
08_02_1446 + 27156449-27156790,27157961-27158042,27158698-271587... 62 7e-10
03_01_0389 + 3021849-3022136,3022237-3022753,3022835-3022988,302... 59 4e-09
03_06_0758 - 36052261-36052301,36052463-36052697,36052895-360529... 51 1e-06
07_01_0023 - 154119-154541,154697-154741,154875-154922,156104-15... 50 2e-06
09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991... 49 4e-06
10_08_0151 - 15229235-15229243,15230032-15230103,15230369-152304... 45 7e-05
12_01_0645 - 5468344-5470266 31 1.2
09_02_0516 - 10136400-10136516,10136606-10136894,10137578-101381... 31 1.2
01_07_0160 - 41563109-41563468,41563566-41563985,41564082-415642... 31 1.5
02_02_0436 - 10212611-10212984,10213213-10213642,10213660-10215459 30 2.7
03_06_0105 + 31675083-31675313,31676171-31676815 29 3.6
02_02_0565 + 11550071-11550909,11551603-11553133,11553205-11553537 29 3.6
12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047 29 6.2
05_02_0043 + 5964749-5966406,5966725-5966791,5967174-5967329,596... 29 6.2
08_02_0243 - 14708055-14708416,14708487-14709324,14709482-147103... 28 8.3
06_03_1362 + 29571324-29571564,29571746-29571921,29571972-295722... 28 8.3
05_05_0339 + 24213179-24213821,24214402-24214623,24215035-242152... 28 8.3
04_04_1294 - 32424762-32426309 28 8.3
01_07_0128 + 41238510-41239146,41239420-41239461,41240076-412402... 28 8.3
>04_04_0385 -
24858580-24858721,24858772-24858850,24859155-24859302,
24859939-24860239,24860327-24860407,24860727-24860875,
24861073-24861215,24861404-24861556,24861664-24861742,
24861851-24861916
Length = 446
Score = 80.6 bits (190), Expect = 1e-15
Identities = 55/165 (33%), Positives = 93/165 (56%), Gaps = 12/165 (7%)
Frame = +3
Query: 309 IIRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRLAK-LTEDTDVIANALNK 482
++RQVE+YF D NL RD FL++ + + +DG V L ++ F+R+ K L D DV + +
Sbjct: 19 VLRQVEFYFSDSNLPRDNFLRKTVEESEDGLVSLALICSFSRMKKHLGLDLDVKQETMPE 78
Query: 483 ST----------SGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASL 632
T S L V+ED KKV R+ E L ++ +E+ +++ +R+I A F + L
Sbjct: 79 ETVLAVAEVLRRSSALRVTEDGKKVGRSIE--LSKL-DEIMEQVDSRTIAASPFPYNVKL 135
Query: 633 DDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQA 767
+D+ ++F Q+ +V +V + R++ KR F G+ F E+A
Sbjct: 136 EDVQSFFAQYGKVNSVRLPRHI---ADKRHFCGTALVEFSEEEEA 177
>01_06_0756 -
31731607-31731752,31732368-31732467,31732716-31732943,
31733390-31733474,31733583-31733662,31733755-31733826,
31733964-31734058,31735442-31735523,31735646-31735927
Length = 389
Score = 74.1 bits (174), Expect = 1e-13
Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Frame = +3
Query: 294 ELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIAN 470
EL I++QVEYYF D NL D+FL + +K + G+VP+ ++ F R+ KL++D +I
Sbjct: 86 ELCDRIVKQVEYYFSDENLPTDEFLIKFVKKNKQGFVPIGVIASFRRMKKLSQDLSIIEA 145
Query: 471 ALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNY 650
AL TS L VS D K+VRR PLP N EL ++ R + + D S++ +
Sbjct: 146 ALR--TSSKLVVSPDGKRVRR--LHPLP--NNEL-NDVKKRIVVVENLPSDFSMESIHAK 198
Query: 651 FKQFQEVENV 680
F+ ++ +
Sbjct: 199 FETVGKIAKI 208
>02_04_0575 -
24000191-24000302,24000710-24000788,24001017-24001164,
24001704-24002100,24002188-24002268,24002688-24002836,
24003152-24003294,24003643-24003795,24003912-24003990,
24004113-24004175
Length = 467
Score = 72.5 bits (170), Expect = 4e-13
Identities = 51/167 (30%), Positives = 91/167 (54%), Gaps = 12/167 (7%)
Frame = +3
Query: 306 AIIRQVEYYFGDVNLHRDKFLQEQI-KLDDGWVPLEILTKFNRL-------AKLTEDT-- 455
+++RQVE+YF D NL RDKFL+E + + +DG V L ++ F R+ A + +T
Sbjct: 17 SVLRQVEFYFSDSNLPRDKFLRETVEQREDGLVSLALICSFARMKSHLGLDAAVKPETVP 76
Query: 456 --DVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDAS 629
V+A A S +L +SED K V R E +E+ K++ +R++ A +
Sbjct: 77 EETVLAVAEVLRRSQMLRISEDGKMVGRASEL---LKADEIIKQVDSRTVAASPLPYNVK 133
Query: 630 LDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQAE 770
L+D+ ++F Q+ +V +V + R++ + K+ F G+ F ++A+
Sbjct: 134 LEDVQSFFAQYAKVNSVRLPRHI---SNKKHFCGTALVEFSEEDEAK 177
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 67.3 bits (157), Expect = 1e-11
Identities = 36/79 (45%), Positives = 47/79 (59%)
Frame = +3
Query: 294 ELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANA 473
EL I+ QVEYYF D NL D FL+ + + GWVP+ + FNRL K+T D +I A
Sbjct: 327 ELRAKILTQVEYYFSDSNLDHDNFLKSLMD-EHGWVPISKVADFNRLKKMTTDIQLIVEA 385
Query: 474 LNKSTSGLLEVSEDNKKVR 530
L + S LLEV + N + R
Sbjct: 386 L--ANSSLLEVQDGNMRRR 402
>03_05_0049 -
20277234-20277251,20277670-20277795,20278085-20278153,
20278233-20278280,20278413-20278494,20278583-20278662,
20278764-20278835,20278912-20279006,20280396-20280477,
20280604-20280963
Length = 343
Score = 65.7 bits (153), Expect = 4e-11
Identities = 44/130 (33%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
Frame = +3
Query: 300 DIA--IIRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIAN 470
DIA II+QVEY F D NL + FL + + D + +VP+ +++ + ++ + ++ N
Sbjct: 112 DIAQKIIKQVEYQFSDTNLVANDFLMKIMNKDPECYVPMSVISSWKKIKAMGVTNQLLVN 171
Query: 471 ALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNY 650
AL TS L VS+D KKVRR QP E ++E E+ +R + A+ +D++ + L
Sbjct: 172 ALR--TSSKLVVSDDGKKVRR--AQPFTERHKE---ELQSRMVIAENLPEDSTRNSLEKI 224
Query: 651 FKQFQEVENV 680
F V+N+
Sbjct: 225 FGIIGSVKNI 234
>12_01_0752 -
6798938-6799312,6799628-6799768,6800257-6800325,
6800407-6800454,6801740-6801836,6801922-6802001,
6802099-6802170,6802335-6802429,6802853-6802934,
6805476-6805853
Length = 478
Score = 63.7 bits (148), Expect = 2e-10
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Frame = +3
Query: 219 EDKEVTVETNGQEENAKTENSEDETELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLD-DG 395
E++E V+ + E + + E+ I +QVEYYF D+NL + L I D +G
Sbjct: 94 EEQEAEVDPDATEAAEPLVDGFPD-EVVHKITKQVEYYFSDINLATTEHLMRFITKDPEG 152
Query: 396 WVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELR 575
+VP+ ++ FN++ L + ++A AL TS L VS+D K+V+R + +M
Sbjct: 153 YVPITVIAGFNKIKALVHNNSMLAAALR--TSSKLVVSDDGKRVKRLQSFTVSDM----- 205
Query: 576 KEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENV 680
+++ +R + A+ D +L+ F V+ +
Sbjct: 206 QDLQSRIVVAENLPGDPCYQNLMKIFSTVGSVKTI 240
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 63.3 bits (147), Expect = 2e-10
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Frame = +3
Query: 306 AIIRQVEYYFGDVNLHRDKFLQEQIKLD-DGWVPLEILTKFNRLAKLTEDTDVIANALNK 482
A++ +VEYYF D+NL + L I D +G+VP+ ++ F ++ L + ++A+AL
Sbjct: 144 AVVPKVEYYFSDINLATTEHLMRFITKDPEGYVPISVVAGFKKIKALIQSNAMLASALR- 202
Query: 483 STSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQF 662
TS L VS D +V+R EQP E + E E+ R + A+ D +L+ F
Sbjct: 203 -TSSKLVVSNDGTRVKR--EQPFTESDLE---ELQARIVVAENLPDDHCYQNLMKLFSTV 256
Query: 663 QEVENV 680
V+ +
Sbjct: 257 GSVKTI 262
>08_02_1446 +
27156449-27156790,27157961-27158042,27158698-27158792,
27159421-27159492,27159572-27159651,27159728-27159827,
27160064-27160141,27160408-27160455,27160570-27160638,
27161035-27161175,27161262-27161516
Length = 453
Score = 61.7 bits (143), Expect = 7e-10
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Frame = +3
Query: 309 IIRQVEYYFGDVNLHRDKFLQE-QIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKS 485
+++QVE+YF DVNL + L + I+ +G+VP+ ++ F ++ +L + +A L
Sbjct: 111 VVKQVEFYFSDVNLATTEHLMKFMIRDPEGFVPMSVVASFRKIRELVSERSALAAVLR-- 168
Query: 486 TSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQ 665
TS L VS+D K+VRR E +E+ +R + A+ ++ +L+ F F
Sbjct: 169 TSAELVVSDDGKRVRRR-----VLFTEADAEEVQSRIVVAENLREEHRYPNLMKIFSAFG 223
Query: 666 EVENV 680
V+++
Sbjct: 224 SVKSI 228
>03_01_0389 +
3021849-3022136,3022237-3022753,3022835-3022988,
3023076-3023166,3024556-3024627,3026366-3026689
Length = 481
Score = 59.3 bits (137), Expect = 4e-09
Identities = 30/78 (38%), Positives = 47/78 (60%)
Frame = +3
Query: 309 IIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKST 488
+++Q+EYYF D NL +D FL+ + D GWVPL ++ FN++ KLT + I + +ST
Sbjct: 311 LLKQIEYYFSDDNLCKDIFLRRHMD-DQGWVPLPLIAGFNQVKKLTNNVQFILETVLQST 369
Query: 489 SGLLEVSEDNKKVRRNPE 542
++EV D + R E
Sbjct: 370 --VVEVQGDKLRKRERWE 385
>03_06_0758 -
36052261-36052301,36052463-36052697,36052895-36052966,
36056477-36056567,36056650-36056872,36056964-36057300,
36057406-36057588
Length = 393
Score = 51.2 bits (117), Expect = 1e-06
Identities = 27/93 (29%), Positives = 52/93 (55%)
Frame = +3
Query: 255 EENAKTENSEDETELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRL 434
+ + + E D + +++Q+E+YF NL D FL+ + D GWV + ++ FN++
Sbjct: 221 QPDPEPEPDADPQQHRANLLKQIEFYFSKDNLCTDVFLRRNMD-DQGWVNIALIAGFNKV 279
Query: 435 AKLTEDTDVIANALNKSTSGLLEVSEDNKKVRR 533
+ T+D I + + +S +LE+ +D K+RR
Sbjct: 280 QESTDDLQYIKDTI--QSSSILEMQDD--KIRR 308
>07_01_0023 -
154119-154541,154697-154741,154875-154922,156104-156185,
156365-156444,156606-156677,156827-156921,157479-157515
Length = 293
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/115 (32%), Positives = 58/115 (50%)
Frame = +3
Query: 372 EQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPL 551
+Q + G VPL ++ + ++ L ++ AL ST L VS+D KKVRR QP
Sbjct: 5 QQESISSG-VPLSVIASWKKIKSLGATNQMLVKALRTSTK--LIVSDDGKKVRR--RQPF 59
Query: 552 PEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKK 716
E ++E E+ +R I A+ +D+S + L F V+N+ M E ST +
Sbjct: 60 TEKHKE---ELQSRMIIAENLPEDSSRNSLEKIFGVVGSVKNIKMCHPQEPSTAR 111
>09_06_0123 -
20997498-20997512,20998015-20998100,20999066-20999198,
20999264-20999341,21000130-21000216,21001164-21001254,
21001338-21001488,21001567-21002296,21002404-21002820
Length = 595
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +3
Query: 282 EDETELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLA 437
+D+ L I Q+E+YF NL D FL+ Q+ D GWV ++++TKFNR A
Sbjct: 415 QDQQNLQEDIRTQIEFYFSTNNLCHDTFLRRQMD-DQGWVHIDVITKFNREA 465
>10_08_0151 -
15229235-15229243,15230032-15230103,15230369-15230459,
15230553-15230695,15231910-15232022,15232171-15232315
Length = 190
Score = 45.2 bits (102), Expect = 7e-05
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = +3
Query: 294 ELDIAIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANA 473
E + I Q+EYYF + NL D +L+ + GWVPL ++ F R+ LT D + + +
Sbjct: 120 EREKKIREQIEYYFSENNLCSDVYLKGWMN-QQGWVPLTLVAGFPRVQALTTDYETVQRS 178
Query: 474 LNKST 488
+ ST
Sbjct: 179 VLSST 183
>12_01_0645 - 5468344-5470266
Length = 640
Score = 31.1 bits (67), Expect = 1.2
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Frame = +3
Query: 456 DVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLD 635
+VIAN ++K++S L + ++ R LP+M + L S G D SL
Sbjct: 13 EVIANLIDKASSYLGSNPDRLQESMRMLRLKLPKMRDTLIPAQSRESYSGLGVLLDESLW 72
Query: 636 DLLNYFKQFQEVENVIMRRYVEKSTKKR-LFKGSVFATFKTREQAEKL*MQKGTSME 803
L + ++ ++ V Y EK TK+R + G + ++F +Q + G ++E
Sbjct: 73 RLRDAVEELEDA--VDEHAYHEKKTKEREVSDGDLGSSFSKMKQRVIKSLANGRTLE 127
>09_02_0516 -
10136400-10136516,10136606-10136894,10137578-10138110,
10138719-10138892,10138898-10138903
Length = 372
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 156 GFEVKIYKVRPDNFKEIAFKLEKHVFNTIVPPRGFLR 46
GFE KI K P +F+EI ++ + I+ P+G R
Sbjct: 332 GFEGKITKSLPTSFEEIREEIAGFILREIINPKGMFR 368
>01_07_0160 -
41563109-41563468,41563566-41563985,41564082-41564263,
41564362-41564542,41565066-41565084,41565185-41565445,
41566140-41566253,41566264-41566331,41566890-41567018,
41567141-41567245,41567317-41567456,41567519-41567687,
41567824-41567900,41568133-41568187,41568660-41568705,
41568806-41568894,41568996-41569061,41569360-41569425,
41569817-41569906,41570009-41570026
Length = 884
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 588 NRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQA 767
N+ I+ ++A+ +DL +YF +F I+ Y+ K K+ +G F TF A
Sbjct: 238 NKKIFVGRLPQEANTEDLRHYFGKFGR----IVDAYIPKDPKRSGHRGFGFVTFADEGVA 293
Query: 768 EKL 776
+++
Sbjct: 294 DRV 296
>02_02_0436 - 10212611-10212984,10213213-10213642,10213660-10215459
Length = 867
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -2
Query: 108 IAFKLEKHVFNTIVPPR-GFLRN 43
I KLE +V N I+PP GFLRN
Sbjct: 353 ITLKLESNVLNAILPPELGFLRN 375
>03_06_0105 + 31675083-31675313,31676171-31676815
Length = 291
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/78 (20%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 549 LPEMNEELRKE--ICNRSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRL 722
+ N+ ++K I + ++ G + ++ DL++YF++F + + ++ R ++T +
Sbjct: 96 IKNQNDSVQKNQFIFQKKVFVGGLHETVTVKDLISYFEKFGTITDAVVMR--NRTTNRA- 152
Query: 723 FKGSVFATFKTREQAEKL 776
+G F +F + E K+
Sbjct: 153 -RGFGFISFDSHEAVCKI 169
>02_02_0565 + 11550071-11550909,11551603-11553133,11553205-11553537
Length = 900
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +3
Query: 429 RLAKLTEDTDVIANALNKSTSGLLEVSEDNKKVRRNPEQPLPEMNEELRKEICNRSIYAK 608
R +L D +V+ K L ++ + + + E+ L + + L K RS+YA
Sbjct: 692 RTIRLPNDPNVV-----KEIGALAQLQTLDITILNSSEEVLANLADALDKTNNLRSLYAY 746
Query: 609 GFAKDASLDDLLNY 650
G KD D LLN+
Sbjct: 747 GTGKDEHKDRLLNF 760
>12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047
Length = 524
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +3
Query: 519 KKVRRNPEQPLPEMNEELRKEICNRSIYAKGFAKDASLDDLLNYFKQFQEV 671
KK NPE P+P +E++++E+ + A L++ + + Q++
Sbjct: 468 KKFEENPEAPVPSADEDVKQEMAANPLAAISAPLGFYLENAIQALQAIQKI 518
>05_02_0043 +
5964749-5966406,5966725-5966791,5967174-5967329,
5967782-5967865,5968020-5968073
Length = 672
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +3
Query: 330 YFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVS 509
Y GD+ +++ KFL Q L DG L L+++N + + + +K+ G L
Sbjct: 116 YSGDIKMNKRKFL--QTLLLDGCFVLVSLSQYNEFLWPDSLRYIPSPSNDKTFEGALSFG 173
Query: 510 EDNKKVRRNPEQPLPEMNEELRK 578
+ K RN Q + + + K
Sbjct: 174 DHQKVTGRNESQQVNKGKQSAMK 196
>08_02_0243 -
14708055-14708416,14708487-14709324,14709482-14710323,
14710466-14710520,14711535-14711549,14713030-14713033,
14713340-14713424,14714045-14714084
Length = 746
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -1
Query: 469 FAMTSVSSVSLARRLNFVRISNGTHPSSNFICSCRNLSRCRFT 341
F + + S+S RRL +++ + P+S +C+ R+L T
Sbjct: 635 FRLDELDSLSKIRRLLLIKLEKASPPASPVLCNKRHLKELGLT 677
>06_03_1362 +
29571324-29571564,29571746-29571921,29571972-29572251,
29572949-29573085,29573174-29573401
Length = 353
Score = 28.3 bits (60), Expect = 8.3
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 8/122 (6%)
Frame = +3
Query: 393 GWVPLEILTKFNRLAKLTEDTDVIANALNKSTSGLLEVSEDNK-----KVRRNPEQPLPE 557
GW T ++ K T++ +V A NK+ E D KV + PE+ +
Sbjct: 230 GWDVFNQKTLYDAYKKRTKNIEVDMEAYNKAKEADPEFYRDASSLQYGKVSKVPEENIDR 289
Query: 558 MNEELRKEICNRSIYA--KGFAKDASLDDLLNYFKQF-QEVENVIMRRYVEKSTKKRLFK 728
M EL++ R ++ + F +D +D + + + F ++VE + +E K L +
Sbjct: 290 MVNELKERDEKRKAFSRRRKFHEDKDIDSINDRNEHFNKKVERAFGKYTLE--IKNNLER 347
Query: 729 GS 734
G+
Sbjct: 348 GT 349
>05_05_0339 +
24213179-24213821,24214402-24214623,24215035-24215282,
24215385-24215524,24215579-24215753
Length = 475
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 306 AIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANAL 476
A ++ VE GD L+ D+ L++ L+ PL L L + D D++ N L
Sbjct: 106 AYLKYVEARLGDRTLYADEILRDGFCLNMVDTPLCPLKVVTNLQEAVWDADIVINGL 162
>04_04_1294 - 32424762-32426309
Length = 515
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +3
Query: 591 RSIYAKGFAKDASLDDLLNYFKQFQEVENVIMRRYVEKSTKKRLFKGSVFATFKTREQAE 770
R I+ D +D L YF QF E+E + +K+T K KG +K+ E A
Sbjct: 230 RKIFVGNVHADVDVDRLYEYFSQFGEIEEGPLG--FDKTTGKP--KGFALFVYKSVESAR 285
Query: 771 K 773
+
Sbjct: 286 R 286
>01_07_0128 +
41238510-41239146,41239420-41239461,41240076-41240297,
41240909-41241156,41241296-41241435,41241904-41242027
Length = 470
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 306 AIIRQVEYYFGDVNLHRDKFLQEQIKLDDGWVPLEILTKFNRLAKLTEDTDVIANAL 476
A ++ VE GD L+ D+ L++ L+ PL L L + D D++ N L
Sbjct: 104 AYLKYVEARLGDRTLYADEILRDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGL 160
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,153,931
Number of Sequences: 37544
Number of extensions: 354523
Number of successful extensions: 1042
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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