Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_M04
         (884 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0754 - 31515939-31515998,31516372-31516479,31516575-315166...    42   7e-04
02_05_0623 + 30446420-30446525,30446635-30446715,30446811-304469...    35   0.100
05_06_0038 - 25100851-25101474,25101945-25102058,25102151-251024...    30   2.8  
01_06_0835 - 32312264-32312884,32313529-32313642,32313739-323140...    29   5.0  

>02_05_0754 -
           31515939-31515998,31516372-31516479,31516575-31516695,
           31517309-31517370
          Length = 116

 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 18/51 (35%), Positives = 33/51 (64%)
 Frame = +1

Query: 367 LSPIYFLILFGLYSVSVILFRVLTFNNCEEAAKELQREIIEAKKDLHERGL 519
           L PIY ++  G Y + ++ F ++ F  C + A  LQ++I+EAK+ L ++G+
Sbjct: 61  LLPIYLVVALGCYGLFMVGFGLMFFPTCPQEAVLLQQDILEAKEFLSKKGV 111


>02_05_0623 +
           30446420-30446525,30446635-30446715,30446811-30446987,
           30447629-30447799,30448239-30448448,30448634-30448722,
           30449318-30450010
          Length = 508

 Score = 34.7 bits (76), Expect = 0.100
 Identities = 22/56 (39%), Positives = 31/56 (55%)
 Frame = -1

Query: 515 PLSCKSFLASIISLCSSFAASSQLLNVKTLKSITLTEYKPKSIRKYMGDKTI*CMF 348
           P S  S+ A ++S   S AASS +  + +LKS T T    KS+ KY G  T+  +F
Sbjct: 27  PASASSYPAKVVSGFLSNAASSVMKRLWSLKSTTKTGSGGKSMVKYEGGYTVETVF 82


>05_06_0038 -
           25100851-25101474,25101945-25102058,25102151-25102441,
           25102552-25102860,25103458-25104186
          Length = 688

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = -2

Query: 679 LPA*ILTEANERMFIVNFLNIPRVKNYQIPYFLFN*TYTNTNIHLNHNGMF 527
           LPA ++      M I+N L  P+   + +PY LF  T + T  +   +G+F
Sbjct: 525 LPAWVVCYIPATMSILNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLF 575


>01_06_0835 -
           32312264-32312884,32313529-32313642,32313739-32314029,
           32314135-32314443,32315194-32315931
          Length = 690

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -2

Query: 679 LPA*ILTEANERMFIVNFLNIPRVKNYQIPYFLFN*TYTNTNIHLNHNGMF 527
           LPA ++      M ++N L  P+   + +PY LF  T + T  +   +G+F
Sbjct: 528 LPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLF 578


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,538,355
Number of Sequences: 37544
Number of extensions: 331063
Number of successful extensions: 583
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)