Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_M04
         (884 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70684-9|CAA94605.1|   95|Caenorhabditis elegans Hypothetical pr...    45   6e-05
Z78015-3|CAB01435.1|  448|Caenorhabditis elegans Hypothetical pr...    31   1.4  
AF106583-5|AAD03136.1|  301|Caenorhabditis elegans Hypothetical ...    30   1.9  
U41557-4|AAA83305.1|  298|Caenorhabditis elegans Hypothetical pr...    29   5.8  

>Z70684-9|CAA94605.1|   95|Caenorhabditis elegans Hypothetical
           protein F28D1.11 protein.
          Length = 95

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +1

Query: 340 IQENMHQIVLSPIYFLILF-GLYSVSVILFRVLTFNNCEEAAKELQREIIEAKKDLHER 513
           + E +H +V    +F +LF G+Y+V  +++ V TFN+C EA  EL  EI EA+++L  +
Sbjct: 33  LPECLHCLVNYAPFFAVLFLGIYAVFNVVYGVATFNDCAEAKVELLGEIKEAREELKRK 91


>Z78015-3|CAB01435.1|  448|Caenorhabditis elegans Hypothetical
           protein R02D5.6 protein.
          Length = 448

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -1

Query: 194 HHNEQPKFKTLFSIT*FVYVVHISIQNIEITCEL**IIPYL 72
           HHN+   F+  +  T F+ ++++SI ++ I C L  I  YL
Sbjct: 13  HHNDMGDFQVDYGQTLFMCILYLSIGSVSIFCSLTTITLYL 53


>AF106583-5|AAD03136.1|  301|Caenorhabditis elegans Hypothetical
           protein F23C8.8 protein.
          Length = 301

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +1

Query: 325 VKHPLIQENMHQIVLSPIYFLILFGLYSVSVILFRVLTFNNCEE--AAKELQREIIEAKK 498
           V+HP I   +     +P  F+I+   Y    +L  +L     +E   A  L R++IEA  
Sbjct: 79  VRHPHIARCLAITRPAPTKFVIISDYYERGTLLEWILQKKRLKEHPLAATLFRQLIEAIN 138

Query: 499 DLHERGL 519
            LH+RG+
Sbjct: 139 YLHKRGI 145


>U41557-4|AAA83305.1|  298|Caenorhabditis elegans Hypothetical
           protein C50F7.9 protein.
          Length = 298

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
 Frame = +1

Query: 370 SPIYFLILFGLYSVSVILFRVLTFN---NCEEAAKE-LQREIIEAKKDLHERGLRW*TFH 537
           +P++F++L  +  +S+I+FRV+      +   AA+E L  +   A+ D    G  W + H
Sbjct: 8   NPLFFIVLVFVIQLSLIIFRVVFIGKPASSVRAARECLHIQTNTAETDDQFFGRMWPSLH 67

Query: 538 YGLNVCLCLYMFN*TKNMVFGS 603
             ++ C   +  +  K  VFGS
Sbjct: 68  QVVDKCSYRHFRDRVK--VFGS 87


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,501,120
Number of Sequences: 27780
Number of extensions: 342454
Number of successful extensions: 734
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)