Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_L23
(969 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 33 1.6
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 33 1.6
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 33 1.6
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 33 1.6
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 33 1.6
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 33 1.6
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 33 1.6
AK128867-1|BAC87651.1| 121|Homo sapiens protein ( Homo sapiens ... 31 4.8
X17568-1|CAB57868.1| 240|Homo sapiens snRNP B' protein protein. 31 6.3
X17567-1|CAB57867.1| 231|Homo sapiens snRNP B protein protein. 31 6.3
X15893-1|CAA33902.1| 231|Homo sapiens protein ( Human B cod gen... 31 6.3
M34082-1|AAA36579.1| 233|Homo sapiens protein ( Human small nuc... 31 6.3
M34081-1|AAA36578.1| 224|Homo sapiens protein ( Human small nuc... 31 6.3
CR456969-1|CAG33250.1| 240|Homo sapiens SNRPB protein. 31 6.3
BC080516-1|AAH80516.1| 231|Homo sapiens small nuclear ribonucle... 31 6.3
BC003530-1|AAH03530.1| 234|Homo sapiens SNRPB protein protein. 31 6.3
AY742712-1|AAU89981.1| 231|Homo sapiens small nuclear ribonucle... 31 6.3
AL049650-8|CAB46715.1| 240|Homo sapiens small nuclear ribonucle... 31 6.3
AL049650-7|CAB46714.1| 231|Homo sapiens small nuclear ribonucle... 31 6.3
U19927-1|AAC50140.1| 502|Homo sapiens WAS protein. 31 8.4
U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome ... 31 8.4
BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein. 31 8.4
BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrom... 31 8.4
BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein. 31 8.4
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein. 31 8.4
AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein pr... 31 8.4
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 31 8.4
AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen ... 31 8.4
AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrom... 31 8.4
AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein. 31 8.4
>L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein
protein.
Length = 424
Score = 33.1 bits (72), Expect = 1.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 815 PXXPPXGXXPPXXPPXXPPPXXP 883
P PP G PP PP PPP P
Sbjct: 245 PPVPPPGALPPGIPPAMPPPPMP 267
>BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 33.1 bits (72), Expect = 1.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 815 PXXPPXGXXPPXXPPXXPPPXXP 883
P PP G PP PP PPP P
Sbjct: 245 PPVPPPGALPPGIPPAMPPPPMP 267
>BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 33.1 bits (72), Expect = 1.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 815 PXXPPXGXXPPXXPPXXPPPXXP 883
P PP G PP PP PPP P
Sbjct: 245 PPVPPPGALPPGIPPAMPPPPMP 267
>BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 33.1 bits (72), Expect = 1.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 815 PXXPPXGXXPPXXPPXXPPPXXP 883
P PP G PP PP PPP P
Sbjct: 245 PPVPPPGALPPGIPPAMPPPPMP 267
>AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 33.1 bits (72), Expect = 1.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 815 PXXPPXGXXPPXXPPXXPPPXXP 883
P PP G PP PP PPP P
Sbjct: 245 PPVPPPGALPPGIPPAMPPPPMP 267
>AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b,
subunit 4, 49kDa protein.
Length = 424
Score = 33.1 bits (72), Expect = 1.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 815 PXXPPXGXXPPXXPPXXPPPXXP 883
P PP G PP PP PPP P
Sbjct: 245 PPVPPPGALPPGIPPAMPPPPMP 267
>AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b,
subunit 4 variant protein.
Length = 424
Score = 33.1 bits (72), Expect = 1.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 815 PXXPPXGXXPPXXPPXXPPPXXP 883
P PP G PP PP PPP P
Sbjct: 245 PPVPPPGALPPGIPPAMPPPPMP 267
>AK128867-1|BAC87651.1| 121|Homo sapiens protein ( Homo sapiens
cDNA FLJ46838 fis, clone UTERU2035926. ).
Length = 121
Score = 31.5 bits (68), Expect = 4.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 823 PPPGXXPPXPPPXXXPPG 876
PPP PP PPP PPG
Sbjct: 88 PPPPPPPPPPPPLPPPPG 105
>X17568-1|CAB57868.1| 240|Homo sapiens snRNP B' protein protein.
Length = 240
Score = 31.1 bits (67), Expect = 6.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 823 PPPGXXPPXPPPXXXPPG 876
PPPG PP PP PPG
Sbjct: 191 PPPGMRPPMGPPMGIPPG 208
>X17567-1|CAB57867.1| 231|Homo sapiens snRNP B protein protein.
Length = 231
Score = 31.1 bits (67), Expect = 6.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 823 PPPGXXPPXPPPXXXPPG 876
PPPG PP PP PPG
Sbjct: 191 PPPGMRPPMGPPMGIPPG 208
>X15893-1|CAA33902.1| 231|Homo sapiens protein ( Human B cod gene
for B/B' snRNP associated protein. ).
Length = 231
Score = 31.1 bits (67), Expect = 6.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 823 PPPGXXPPXPPPXXXPPG 876
PPPG PP PP PPG
Sbjct: 191 PPPGMRPPMGPPMGIPPG 208
>M34082-1|AAA36579.1| 233|Homo sapiens protein ( Human small
nuclear ribonucleoprotein particle SmB' mRNA, 3' end. ).
Length = 233
Score = 31.1 bits (67), Expect = 6.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 823 PPPGXXPPXPPPXXXPPG 876
PPPG PP PP PPG
Sbjct: 184 PPPGMRPPMGPPMGIPPG 201
>M34081-1|AAA36578.1| 224|Homo sapiens protein ( Human small
nuclear ribonucleoprotein particle SmB mRNA, 3' end. ).
Length = 224
Score = 31.1 bits (67), Expect = 6.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 823 PPPGXXPPXPPPXXXPPG 876
PPPG PP PP PPG
Sbjct: 184 PPPGMRPPMGPPMGIPPG 201
>CR456969-1|CAG33250.1| 240|Homo sapiens SNRPB protein.
Length = 240
Score = 31.1 bits (67), Expect = 6.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 823 PPPGXXPPXPPPXXXPPG 876
PPPG PP PP PPG
Sbjct: 191 PPPGMRPPMGPPMGIPPG 208
>BC080516-1|AAH80516.1| 231|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 231
Score = 31.1 bits (67), Expect = 6.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 823 PPPGXXPPXPPPXXXPPG 876
PPPG PP PP PPG
Sbjct: 191 PPPGMRPPMGPPMGIPPG 208
>BC003530-1|AAH03530.1| 234|Homo sapiens SNRPB protein protein.
Length = 234
Score = 31.1 bits (67), Expect = 6.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 823 PPPGXXPPXPPPXXXPPG 876
PPPG PP PP PPG
Sbjct: 191 PPPGMRPPMGPPMGIPPG 208
>AY742712-1|AAU89981.1| 231|Homo sapiens small nuclear
ribonucleoprotein polypeptide B protein.
Length = 231
Score = 31.1 bits (67), Expect = 6.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 823 PPPGXXPPXPPPXXXPPG 876
PPPG PP PP PPG
Sbjct: 191 PPPGMRPPMGPPMGIPPG 208
>AL049650-8|CAB46715.1| 240|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 240
Score = 31.1 bits (67), Expect = 6.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 823 PPPGXXPPXPPPXXXPPG 876
PPPG PP PP PPG
Sbjct: 191 PPPGMRPPMGPPMGIPPG 208
>AL049650-7|CAB46714.1| 231|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 231
Score = 31.1 bits (67), Expect = 6.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 823 PPPGXXPPXPPPXXXPPG 876
PPPG PP PP PPG
Sbjct: 191 PPPGMRPPMGPPMGIPPG 208
>U19927-1|AAC50140.1| 502|Homo sapiens WAS protein.
Length = 502
Score = 30.7 bits (66), Expect = 8.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 815 PXXPPXGXXPPXXPPXXPPPXXP 883
P PP PP PP PPP P
Sbjct: 382 PPPPPGAGGPPMPPPPPPPPPPP 404
>U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome
protein protein.
Length = 502
Score = 30.7 bits (66), Expect = 8.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 815 PXXPPXGXXPPXXPPXXPPPXXP 883
P PP PP PP PPP P
Sbjct: 382 PPPPPGAGGPPMPPPPPPPPPPP 404
>BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein.
Length = 682
Score = 30.7 bits (66), Expect = 8.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 823 PPPGXXPPXPPPXXXPPG 876
P PG PP PPP PPG
Sbjct: 161 PLPGDLPPPPPPPPPPPG 178
>BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) protein.
Length = 502
Score = 30.7 bits (66), Expect = 8.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 815 PXXPPXGXXPPXXPPXXPPPXXP 883
P PP PP PP PPP P
Sbjct: 382 PPPPPGAGGPPMPPPPPPPPPPP 404
>BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein.
Length = 514
Score = 30.7 bits (66), Expect = 8.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 815 PXXPPXGXXPPXXPPXXPPPXXP 883
P PP PP PP PPP P
Sbjct: 394 PPPPPGAGGPPMPPPPPPPPPPP 416
>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
Length = 1100
Score = 30.7 bits (66), Expect = 8.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 823 PPPGXXPPXPPPXXXPPG 876
P PG PP PPP PPG
Sbjct: 579 PLPGDLPPPPPPPPPPPG 596
>AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein
protein.
Length = 1009
Score = 30.7 bits (66), Expect = 8.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 803 VXKXPXXPPXGXXPPXXPPXXPPPXXP 883
V P PP PP PP PPP P
Sbjct: 459 VQNGPVTPPMPPPPPPPPPPPPPPPPP 485
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 30.7 bits (66), Expect = 8.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 815 PXXPPXGXXPPXXPPXXPPPXXP 883
P PP PP PP PPP P
Sbjct: 317 PPMPPVSAGPPLPPPPPPPPPLP 339
>AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen
KW-13 protein.
Length = 991
Score = 30.7 bits (66), Expect = 8.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 823 PPPGXXPPXPPPXXXPPG 876
P PG PP PPP PPG
Sbjct: 470 PLPGDLPPPPPPPPPPPG 487
>AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrome
protein protein.
Length = 502
Score = 30.7 bits (66), Expect = 8.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 815 PXXPPXGXXPPXXPPXXPPPXXP 883
P PP PP PP PPP P
Sbjct: 382 PPPPPGAGGPPMPPPPPPPPPPP 404
>AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.
Length = 1112
Score = 30.7 bits (66), Expect = 8.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 803 VXKXPXXPPXGXXPPXXPPXXPPPXXP 883
V P PP PP PP PPP P
Sbjct: 562 VQNGPVTPPMPPPPPPPPPPPPPPPPP 588
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,890,957
Number of Sequences: 237096
Number of extensions: 1156655
Number of successful extensions: 17087
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11956
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12880737904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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