Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_L22
         (890 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical pr...    52   6e-07
Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z79694-3|CAB01962.3|  594|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U80839-11|AAB37912.2|  261|Caenorhabditis elegans Hypothetical p...    28   7.8  
AY387697-1|AAR26326.1|  594|Caenorhabditis elegans SOL-1 protein.      28   7.8  

>Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical
           protein F10G8.6 protein.
          Length = 313

 Score = 52.0 bits (119), Expect = 6e-07
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
 Frame = +2

Query: 449 NLACAMKVIEPDKEIGLLDADVFGPSVPLMMNISGEPMLNDDHLIEPL-LNYGVKCMSMG 625
           NLA A+   +P K++ +LD D+ GPS P MM +  E + N      P+ +   +  MS+ 
Sbjct: 78  NLARAL-ASDPSKQVAILDVDICGPSQPRMMGVEDEEVHNSADGWTPVGIQPNLTLMSIA 136

Query: 626 LLVSGEN-AVXWRGLMVMQALERLTRHVAWG 715
            L+  +N AV WRG      +++  + V WG
Sbjct: 137 FLLGDKNDAVIWRGARKNGMIKQFLKDVDWG 167



 Score = 40.7 bits (91), Expect = 0.001
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
 Frame = +1

Query: 712 GSLDCLVVXTPPGXGDTHLSLA----QNXPLDGAIVVXPP 819
           G +D L++ TPPG  D H+SL     Q  PLDGA++V  P
Sbjct: 167 GEVDYLLIDTPPGTSDEHISLVQFLLQAGPLDGALIVSTP 206


>Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical
           protein K10C3.5b protein.
          Length = 705

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 467 KVIEPDKEIGLLDADVFGPSVPLMMNISGEPMLNDDHLIE 586
           K I+   ++GL+D DV  P VP M  +  + +L+   +IE
Sbjct: 529 KCIKDLNDLGLVDLDVSEPIVPFMETVIEDSVLSAPQIIE 568


>Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical
           protein K10C3.5a protein.
          Length = 894

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 467 KVIEPDKEIGLLDADVFGPSVPLMMNISGEPMLNDDHLIE 586
           K I+   ++GL+D DV  P VP M  +  + +L+   +IE
Sbjct: 529 KCIKDLNDLGLVDLDVSEPIVPFMETVIEDSVLSAPQIIE 568


>Z79694-3|CAB01962.3|  594|Caenorhabditis elegans Hypothetical
           protein C15A11.3 protein.
          Length = 594

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +2

Query: 107 KNLQAAYIF*ARKDHVN*AHFTYLSLLYQNKYQLNMTLQRRFLRFSSSYVFSTRMNTHHA 286
           +NL   YIF  R D V   HF Y  +  +   Q + T Q  ++ FS+   + T   T+  
Sbjct: 460 RNLYCEYIFHGRNDQVVHIHFEYFDI--EGFNQCDETTQSDYILFSN---YQTHDRTNRR 514

Query: 287 F 289
           F
Sbjct: 515 F 515


>U80839-11|AAB37912.2|  261|Caenorhabditis elegans Hypothetical
           protein ZC204.3 protein.
          Length = 261

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +2

Query: 164 HFTYLSLLYQNKYQLNMTLQRRFLRFSSSYVFSTRMNTHHAF 289
           HF+   +    + ++ M   ++ LRF  S    +R+NTHHAF
Sbjct: 23  HFSASYVDNDGQLEIFMDRLKKRLRFGWSCNCESRLNTHHAF 64


>AY387697-1|AAR26326.1|  594|Caenorhabditis elegans SOL-1 protein.
          Length = 594

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +2

Query: 107 KNLQAAYIF*ARKDHVN*AHFTYLSLLYQNKYQLNMTLQRRFLRFSSSYVFSTRMNTHHA 286
           +NL   YIF  R D V   HF Y  +  +   Q + T Q  ++ FS+   + T   T+  
Sbjct: 460 RNLYCEYIFHGRNDQVVHIHFEYFDI--EGFNQCDETTQSDYILFSN---YQTHDRTNRR 514

Query: 287 F 289
           F
Sbjct: 515 F 515


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,740,541
Number of Sequences: 27780
Number of extensions: 370686
Number of successful extensions: 729
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)