Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_L20
(915 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF065164-1|AAC28444.2| 889|Homo sapiens hyperpolarization-activ... 32 3.3
X07516-1|CAA30394.2| 297|Homo sapiens salivary proline-rich pro... 31 4.4
S62941-1|AAB27289.1| 358|Homo sapiens Ps 2 protein. 31 4.4
S62928-1|AAB27288.2| 297|Homo sapiens PRB1M protein precursor p... 31 4.4
S52986-1|AAA13341.2| 331|Homo sapiens basic salivary proline-ri... 31 4.4
M97220-1|AAB05816.1| 331|Homo sapiens salivary proline-rich pro... 31 4.4
K03204-1|AAA60185.1| 331|Homo sapiens PRB1 protein. 31 4.4
BC044827-1|AAH44827.1| 338|Homo sapiens PRB2 protein protein. 31 4.4
DQ854815-1|ABI75145.1| 112|Homo sapiens hyperpolarization-activ... 31 7.7
AJ133727-1|CAB42630.1| 889|Homo sapiens hyperpolarization-activ... 31 7.7
AJ012582-1|CAB42602.1| 889|Homo sapiens hyperpolarization-activ... 31 7.7
AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization activ... 31 7.7
>AF065164-1|AAC28444.2| 889|Homo sapiens
hyperpolarization-activated, cyclic nucleotide-gated
channel 2 protein.
Length = 889
Score = 31.9 bits (69), Expect = 3.3
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = +3
Query: 594 GXNPXKAPXXWXFXXRPPPPXXXFQKXRPPXXRVXXPPPGXXKXP 728
G P ++P PPPP K +PP PPPG P
Sbjct: 7 GGRPGESPGASPTTGPPPPPPPRPPKQQPPPPPPPAPPPGPGPAP 51
>X07516-1|CAA30394.2| 297|Homo sapiens salivary proline-rich
protein protein.
Length = 297
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/72 (27%), Positives = 25/72 (34%)
Frame = +3
Query: 519 KGGNRVFXKXGXXPXKXLXXKXPXXGXNPXKAPXXWXFXXRPPPPXXXFQKXRPPXXRVX 698
+GGN+ G P P G N + P PPP Q R P +
Sbjct: 69 QGGNQ---PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQ 125
Query: 699 XPPPGXXKXPRG 734
PPP P+G
Sbjct: 126 GPPPQGGNQPQG 137
>S62941-1|AAB27289.1| 358|Homo sapiens Ps 2 protein.
Length = 358
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/72 (27%), Positives = 25/72 (34%)
Frame = +3
Query: 519 KGGNRVFXKXGXXPXKXLXXKXPXXGXNPXKAPXXWXFXXRPPPPXXXFQKXRPPXXRVX 698
+GGN+ G P P G N + P PPP Q R P +
Sbjct: 69 QGGNQ---PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQ 125
Query: 699 XPPPGXXKXPRG 734
PPP P+G
Sbjct: 126 GPPPQGGNQPQG 137
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/72 (27%), Positives = 25/72 (34%)
Frame = +3
Query: 519 KGGNRVFXKXGXXPXKXLXXKXPXXGXNPXKAPXXWXFXXRPPPPXXXFQKXRPPXXRVX 698
+GGN+ G P P G N + P PPP Q R P +
Sbjct: 130 QGGNQ---PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQ 186
Query: 699 XPPPGXXKXPRG 734
PPP P+G
Sbjct: 187 GPPPQGGNQPQG 198
>S62928-1|AAB27288.2| 297|Homo sapiens PRB1M protein precursor
protein.
Length = 297
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/72 (27%), Positives = 25/72 (34%)
Frame = +3
Query: 519 KGGNRVFXKXGXXPXKXLXXKXPXXGXNPXKAPXXWXFXXRPPPPXXXFQKXRPPXXRVX 698
+GGN+ G P P G N + P PPP Q R P +
Sbjct: 69 QGGNQ---PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQ 125
Query: 699 XPPPGXXKXPRG 734
PPP P+G
Sbjct: 126 GPPPQGGNQPQG 137
>S52986-1|AAA13341.2| 331|Homo sapiens basic salivary proline-rich
protein protein.
Length = 331
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/72 (27%), Positives = 25/72 (34%)
Frame = +3
Query: 519 KGGNRVFXKXGXXPXKXLXXKXPXXGXNPXKAPXXWXFXXRPPPPXXXFQKXRPPXXRVX 698
+GGN+ G P P G N + P PPP Q R P +
Sbjct: 103 QGGNQ---PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQ 159
Query: 699 XPPPGXXKXPRG 734
PPP P+G
Sbjct: 160 GPPPQGGNQPQG 171
>M97220-1|AAB05816.1| 331|Homo sapiens salivary proline-rich
protein protein.
Length = 331
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/72 (27%), Positives = 25/72 (34%)
Frame = +3
Query: 519 KGGNRVFXKXGXXPXKXLXXKXPXXGXNPXKAPXXWXFXXRPPPPXXXFQKXRPPXXRVX 698
+GGN+ G P P G N + P PPP Q R P +
Sbjct: 103 QGGNQ---PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQ 159
Query: 699 XPPPGXXKXPRG 734
PPP P+G
Sbjct: 160 GPPPQGGNQPQG 171
>K03204-1|AAA60185.1| 331|Homo sapiens PRB1 protein.
Length = 331
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/72 (27%), Positives = 25/72 (34%)
Frame = +3
Query: 519 KGGNRVFXKXGXXPXKXLXXKXPXXGXNPXKAPXXWXFXXRPPPPXXXFQKXRPPXXRVX 698
+GGN+ G P P G N + P PPP Q R P +
Sbjct: 103 QGGNQ---PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQ 159
Query: 699 XPPPGXXKXPRG 734
PPP P+G
Sbjct: 160 GPPPQGGNQPQG 171
>BC044827-1|AAH44827.1| 338|Homo sapiens PRB2 protein protein.
Length = 338
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/72 (27%), Positives = 25/72 (34%)
Frame = +3
Query: 519 KGGNRVFXKXGXXPXKXLXXKXPXXGXNPXKAPXXWXFXXRPPPPXXXFQKXRPPXXRVX 698
+GGN+ G P P G N + P PPP Q R P +
Sbjct: 110 QGGNQ---PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSQSPRSPPGKPQ 166
Query: 699 XPPPGXXKXPRG 734
PPP P+G
Sbjct: 167 GPPPQGGNQPQG 178
>DQ854815-1|ABI75145.1| 112|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
potassium channel 2 protein.
Length = 112
Score = 30.7 bits (66), Expect = 7.7
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +3
Query: 594 GXNPXKAPXXWXFXXRPPPPXXXFQKXRPPXXRVXXPPPGXXKXP 728
G P ++P PPPP + +PP PPPG P
Sbjct: 7 GGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAP 51
>AJ133727-1|CAB42630.1| 889|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
channel hHCN2 protein.
Length = 889
Score = 30.7 bits (66), Expect = 7.7
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +3
Query: 594 GXNPXKAPXXWXFXXRPPPPXXXFQKXRPPXXRVXXPPPGXXKXP 728
G P ++P PPPP + +PP PPPG P
Sbjct: 7 GGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAP 51
>AJ012582-1|CAB42602.1| 889|Homo sapiens
hyperpolarization-activated cation channel HCN2 protein.
Length = 889
Score = 30.7 bits (66), Expect = 7.7
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +3
Query: 594 GXNPXKAPXXWXFXXRPPPPXXXFQKXRPPXXRVXXPPPGXXKXP 728
G P ++P PPPP + +PP PPPG P
Sbjct: 7 GGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAP 51
>AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel 2
protein.
Length = 528
Score = 30.7 bits (66), Expect = 7.7
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = +3
Query: 594 GXNPXKAPXXWXFXXRPPPPXXXFQKXRPPXXRVXXPPPGXXKXP 728
G P ++P PPPP + +PP PPPG P
Sbjct: 7 GGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAP 51
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,804,820
Number of Sequences: 237096
Number of extensions: 987264
Number of successful extensions: 2573
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2428
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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