Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_L16
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531...    30   2.2  

>06_03_0999 - 26752410-26752523,26752601-26752830,26752914-26753169,
            26753763-26753828,26753921-26754046,26754148-26754288,
            26754377-26754387,26754523-26754670,26755326-26755454,
            26755573-26755710,26755808-26755876,26755955-26756023,
            26756565-26756720,26756885-26756985,26757068-26757215,
            26757540-26757702,26757833-26757965,26758049-26758226,
            26758330-26758572,26758664-26758732,26759063-26759187,
            26759727-26759766,26760756-26760812,26762831-26762935
          Length = 1004

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 24/68 (35%), Positives = 33/68 (48%)
 Frame = +1

Query: 643  SEASISKQSEPAKKKTVVPEDKFDSDESNAPATEGSTVDYELSLYISTPSKTCCTSDYSS 822
            S A+IS   E   + T++P+    S + N P  E S    E +   STPSK   T   + 
Sbjct: 869  SIAAISASFE-RPRPTLIPKSIKASPDVNKPQVEASKPKPEANGKDSTPSKDSPTVTPTI 927

Query: 823  QED*KVGK 846
            QED K G+
Sbjct: 928  QEDLKEGQ 935


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,068,556
Number of Sequences: 37544
Number of extensions: 372203
Number of successful extensions: 846
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)