Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_L13
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0894 - 21365629-21365766,21365849-21365950,21366042-213662...    32   0.52 
02_05_1213 - 34963971-34964658,34965030-34965270,34965347-349657...    30   2.8  
03_05_0554 - 25551220-25551310,25551562-25551695,25552115-255522...    29   6.5  

>10_08_0894 -
           21365629-21365766,21365849-21365950,21366042-21366284,
           21366685-21366813,21366999-21367103,21367196-21367387,
           21367486-21367639,21368148-21368209,21368291-21368437,
           21368517-21368564,21369091-21369228,21369305-21369451,
           21370579-21370665,21370754-21370861,21370941-21371041,
           21371870-21371996,21372820-21372936,21373029-21373106,
           21373240-21373284,21373637-21373756,21373838-21373964,
           21374033-21374253,21374347-21374529,21374772-21374924,
           21375051-21375146,21375226-21375331,21375410-21375492,
           21375576-21375728,21375819-21376058,21376367-21376414,
           21376782-21376928,21377007-21377115,21377200-21377345,
           21377715-21377809,21377944-21378049,21378177-21378368,
           21378456-21378686,21378772-21378866,21379426-21379529,
           21380040-21380284,21380300-21380347,21380376-21380480,
           21380630-21380767,21381458-21381649,21381738-21381914,
           21382001-21382129,21382203-21382316,21382407-21382746,
           21382836-21383064,21383155-21383455,21384311-21384358,
           21387963-21388355
          Length = 2493

 Score = 32.3 bits (70), Expect = 0.52
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = -2

Query: 708 VLSCPLTYILIMVNTVFTIRAHGTRAQ-GPHSQGAPNDRQFLSHIYSQNIFVGHITLFSQ 532
           +LS  L   L  V  V   R HG   +  P S+G P+D +  ++IY   +F G I++ + 
Sbjct: 747 LLSNQLVEELRRVEAVHESRNHGVVGRDAPTSEGGPDDIEAQANIYFHQMFSGQISVDAM 806

Query: 531 ISSFIR 514
           +    R
Sbjct: 807 VQMLAR 812


>02_05_1213 -
           34963971-34964658,34965030-34965270,34965347-34965736,
           34966515-34966781,34966881-34967249,34967931-34968014,
           34968113-34968226,34969952-34970018
          Length = 739

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 687 YILIMVNTVFTIRAHGTRAQGPHSQGAPNDR 595
           ++L+M+  V+T+ A    +  PH  G+P+ R
Sbjct: 10  FVLLMLGAVYTLHATALPSPAPHPSGSPDTR 40


>03_05_0554 -
           25551220-25551310,25551562-25551695,25552115-25552221,
           25552359-25552437,25552524-25552613,25552790-25553044,
           25553388-25553537,25553677-25553976
          Length = 401

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -3

Query: 233 IRFFYFPKGPQILVCPSLI 177
           I+ F+ PKG +I++CPS +
Sbjct: 290 IKGFFIPKGSKIMICPSTV 308


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,017,077
Number of Sequences: 37544
Number of extensions: 385344
Number of successful extensions: 754
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)