Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_L12
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF099001-2|AAC68735.1| 168|Caenorhabditis elegans Hypothetical ... 30 2.7
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z81077-6|CAB03069.1| 167|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 29 6.1
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 29 6.1
U53149-1|AAD31546.1| 328|Caenorhabditis elegans Prion-like-(q/n... 28 8.1
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -1
Query: 540 RCTCVTPFDGNRCCISRV*LCSKERFHGTTPGDIPRRRCLALP 412
+C C T F G RC I S HG + R+CL P
Sbjct: 50 KCECPTGFSGKRCHIKENLCASSPCVHGLCIDKLYSRQCLCQP 92
>AF099001-2|AAC68735.1| 168|Caenorhabditis elegans Hypothetical
protein R160.4 protein.
Length = 168
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 780 CCSRADACARSSTSGVQTARTAGVPLPTSSVHTAR---TGRVPL 902
CC R +C R G + A A +P +S+ T GR+PL
Sbjct: 114 CCGRRGSCCRPELEGDEDAENAQGSIPLASLGTTNDPLPGRLPL 157
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +3
Query: 690 KRRALSPMCKVSSESAPCSSRRAQSRAACTCCSRADACARSSTSGVQTARTAGVPLPTSS 869
K L + S+ES+ SS + S A A TSG T ++G P +S
Sbjct: 62 KTANLKHPARPSTESSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTTASSGAPAASSG 121
Query: 870 VHTAR 884
+AR
Sbjct: 122 GSSAR 126
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +3
Query: 690 KRRALSPMCKVSSESAPCSSRRAQSRAACTCCSRADACARSSTSGVQTARTAGVPLPTSS 869
K L + S+ES+ SS + S A A TSG T ++G P +S
Sbjct: 62 KTANLKHPARPSTESSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTTASSGAPAASSG 121
Query: 870 VHTAR 884
+AR
Sbjct: 122 GSSAR 126
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +3
Query: 723 SSESAPCSSRRAQSRAACTCCSRADACARSSTSGVQTARTAGVPLPTSSVHTAR 884
S+ES+ SS + S A A TSG T ++G P +S +AR
Sbjct: 25 STESSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTTASSGAPAASSGGSSAR 78
>Z81077-6|CAB03069.1| 167|Caenorhabditis elegans Hypothetical
protein F36A2.7 protein.
Length = 167
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 452 VVPWN-RSLEHNYTREMQQRFPSKGVTHVHLSILE 553
V PW+ + +NY ++ F GVTH L ILE
Sbjct: 117 VAPWDWERIRNNYWKKPTLVFDPTGVTHQRLEILE 151
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +3
Query: 723 SSESAPCSSRRAQSRAACTCCSRADACARSSTSGVQTARTAGVPLPTSSVHTAR 884
S+ES+ SS + S A A TSG T ++G P +S +AR
Sbjct: 25 STESSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTTASSGAPAASSGGSSAR 78
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +3
Query: 723 SSESAPCSSRRAQSRAACTCCSRADACARSSTSGVQTARTAGVPLPTSSVHTAR 884
S+ES+ SS + S A A TSG T ++G P +S +AR
Sbjct: 25 STESSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTTASSGAPAASSGGSSAR 78
>U53149-1|AAD31546.1| 328|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 16
protein.
Length = 328
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 714 CKVSSESAPCSSRRAQSRAACTCCSRADACARSSTSGVQTARTAGVPL 857
CK S + CS A CTC + + + S+ + V + + VP+
Sbjct: 29 CKCSPPQSSCSCNSAIQSQTCTCHNTQQSTSASNCNCVLKSNSKSVPV 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,622,161
Number of Sequences: 27780
Number of extensions: 412132
Number of successful extensions: 1255
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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