Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_L09
(895 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1568 + 27922338-27922342,27922839-27923058,27923369-279235... 128 8e-30
08_02_1573 + 27956351-27956409,27956411-27956630,27957000-279571... 126 2e-29
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265... 113 1e-25
02_02_0678 + 12868735-12868739,12869576-12869795,12870280-128704... 112 3e-25
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 37 0.019
09_02_0251 - 6282420-6282526,6282642-6283104,6283223-6283289,628... 29 6.6
03_02_0829 - 11599665-11600364,11600853-11601076,11601786-116020... 29 6.6
>08_02_1568 +
27922338-27922342,27922839-27923058,27923369-27923519,
27923874-27924079,27924211-27924264
Length = 211
Score = 128 bits (308), Expect = 8e-30
Identities = 83/217 (38%), Positives = 117/217 (53%), Gaps = 1/217 (0%)
Frame = +1
Query: 73 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 252
SK+ + L E ++ V+ K+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQTEALKEAISQVVADCKEKNRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 253 MQVCVLGDQQHCDEAKTLXCAMYGC*GFEKIE*EQKACQETGQKI*CFPGIRVTDQADSP 432
M+VC+LGD QH +EA+ + +K+ +K ++ +K F + P
Sbjct: 62 MKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIK-QIP 120
Query: 433 XCWVPV*TKLVNSLVFSPTRSP*RRRLMKSREPLSSK*RRCC-VFL*QLAMWT*LLMSLL 609
P +LV + K+ K C V + L+M + +
Sbjct: 121 RLLGP---GKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQNI 177
Query: 610 RMCIFPSTSLXSLLKKHWQNVRSLHMKSTMGPPQRLY 720
+M + L SLLKK+WQNVR L++KSTMG P R++
Sbjct: 178 QMSV---NFLVSLLKKNWQNVRCLYIKSTMGKPYRVF 211
Score = 83.8 bits (198), Expect = 2e-16
Identities = 37/72 (51%), Positives = 53/72 (73%)
Frame = +3
Query: 423 RFPXLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 602
+ P LLGPG KFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG++ M +
Sbjct: 118 QIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQ 172
Query: 603 LAQNVHLSINFL 638
+ QN+ +S+NFL
Sbjct: 173 IQQNIQMSVNFL 184
>08_02_1573 +
27956351-27956409,27956411-27956630,27957000-27957150,
27957602-27957807,27957967-27958020
Length = 229
Score = 126 bits (304), Expect = 2e-29
Identities = 83/216 (38%), Positives = 117/216 (54%), Gaps = 1/216 (0%)
Frame = +1
Query: 76 KVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 255
K+ + L E ++ V+ SK+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPKM
Sbjct: 21 KLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 80
Query: 256 QVCVLGDQQHCDEAKTLXCAMYGC*GFEKIE*EQKACQETGQKI*CFPGIRVTDQADSPX 435
+VC+LGD QH +EA+ + +K+ +K ++ +K F + P
Sbjct: 81 KVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIK-QIPR 139
Query: 436 CWVPV*TKLVNSLVFSPTRSP*RRRLMKSREPLSSK*RRCC-VFL*QLAMWT*LLMSLLR 612
P +LV + K+ K C V + L+M + ++
Sbjct: 140 LLGP---GKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQNIQ 196
Query: 613 MCIFPSTSLXSLLKKHWQNVRSLHMKSTMGPPQRLY 720
M + L SLLKK+WQNVR L++KSTMG P R++
Sbjct: 197 MSV---NFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 229
Score = 83.8 bits (198), Expect = 2e-16
Identities = 37/72 (51%), Positives = 53/72 (73%)
Frame = +3
Query: 423 RFPXLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 602
+ P LLGPG KFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG++ M +
Sbjct: 136 QIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQ 190
Query: 603 LAQNVHLSINFL 638
+ QN+ +S+NFL
Sbjct: 191 IQQNIQMSVNFL 202
>01_06_1419 +
37225007-37225011,37225633-37225852,37226347-37226516,
37226615-37226676,37227002-37227207,37227581-37227634
Length = 238
Score = 113 bits (273), Expect = 1e-25
Identities = 52/108 (48%), Positives = 74/108 (68%)
Frame = +1
Query: 73 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 252
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 253 MQVCVLGDQQHCDEAKTLXCAMYGC*GFEKIE*EQKACQETGQKI*CF 396
M+VC+LGD QH +EA+ + +K+ +K ++ +K F
Sbjct: 62 MKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAF 109
Score = 81.0 bits (191), Expect = 1e-15
Identities = 34/63 (53%), Positives = 49/63 (77%)
Frame = +3
Query: 450 LNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSI 629
++K GKFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG+ M ++ QNV +S+
Sbjct: 149 VSKRGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNCAMEEKQIFQNVQMSV 208
Query: 630 NFL 638
NFL
Sbjct: 209 NFL 211
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +1
Query: 637 LXSLLKKHWQNVRSLHMKSTMGPPQRLY 720
L SLLKK+WQNVR L++KSTMG R++
Sbjct: 211 LVSLLKKNWQNVRCLYLKSTMGKVIRVF 238
>02_02_0678 +
12868735-12868739,12869576-12869795,12870280-12870430,
12870853-12871058,12871166-12871219
Length = 211
Score = 112 bits (270), Expect = 3e-25
Identities = 51/108 (47%), Positives = 74/108 (68%)
Frame = +1
Query: 73 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 252
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQIANDSREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 253 MQVCVLGDQQHCDEAKTLXCAMYGC*GFEKIE*EQKACQETGQKI*CF 396
++VC+LGD QH +EA+ + +K+ +K ++ +K F
Sbjct: 62 LKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAF 109
Score = 82.2 bits (194), Expect = 5e-16
Identities = 38/72 (52%), Positives = 52/72 (72%)
Frame = +3
Query: 423 RFPXLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 602
+ P LLGPG KFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG+ M +
Sbjct: 118 QIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNCAMEEKQ 172
Query: 603 LAQNVHLSINFL 638
+ QNV +S+NFL
Sbjct: 173 IFQNVQMSVNFL 184
Score = 41.9 bits (94), Expect = 7e-04
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +1
Query: 637 LXSLLKKHWQNVRSLHMKSTMGPPQRLY 720
L SLLKK+WQNVR L++KSTMG R++
Sbjct: 184 LVSLLKKNWQNVRCLYLKSTMGKVYRVF 211
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 37.1 bits (82), Expect = 0.019
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 124 SSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAK 300
S+ +KKRNF ETVE + L DP++ D+ G + L + ++V V + DEA+
Sbjct: 279 SANEKKRNFTETVEAHVML-GVDPRRGDQMVRGALTLPHGTGKTVRVAVFAEGPAADEAR 337
Query: 301 TLXCAMYGC*GFEKIE 348
+ G G E IE
Sbjct: 338 AAGADVVG--GDELIE 351
>09_02_0251 -
6282420-6282526,6282642-6283104,6283223-6283289,
6283536-6283808,6284096-6284907,6285402-6285479,
6285586-6285636,6285737-6285817,6285903-6285982,
6288481-6288652
Length = 727
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 552 PSSFGT*WFP*LHQSSASWTPGGREDQGIYQLCSNR 445
P F WFP +H ++ S R Q I+ +C N+
Sbjct: 493 PVYFKNDWFPFIHSTTLSEGTNARRRQDIFGVCCNK 528
>03_02_0829 -
11599665-11600364,11600853-11601076,11601786-11602000,
11602300-11602377,11602593-11603907
Length = 843
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 223 QCRRNACPSVGHSSSDQFEALQSPKS 146
Q RN PS+ H +SD F + SP S
Sbjct: 81 QKSRNLSPSISHQASDSFSPVPSPLS 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,279,546
Number of Sequences: 37544
Number of extensions: 405142
Number of successful extensions: 992
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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