Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_L06
         (919 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC004548-1|AAH04548.2|  441|Homo sapiens hypothetical protein PR...   118   4e-26
AC007390-2|AAY14816.1|  441|Homo sapiens unknown protein.             118   4e-26
BX538031-1|CAD97976.1|  343|Homo sapiens hypothetical protein pr...    35   0.48 
BC019330-1|AAH19330.1|  529|Homo sapiens PODXL2 protein protein.       31   4.4  

>BC004548-1|AAH04548.2|  441|Homo sapiens hypothetical protein
           PRO1853 protein.
          Length = 441

 Score =  118 bits (283), Expect = 4e-26
 Identities = 59/143 (41%), Positives = 86/143 (60%), Gaps = 1/143 (0%)
 Frame = +1

Query: 430 PTPESAPNLIEIIKEKIRLNGPITVAEYMHIVTTNPTEGYYMKKEVIGEAGDFITSPEIS 609
           P       ++  +  KI+  GPITVAEYM  V TNP +GYY+ ++++GE GDFITSPEIS
Sbjct: 35  PAENPVTPMLRHLMYKIKSTGPITVAEYMKEVLTNPAKGYYVYRDMLGEKGDFITSPEIS 94

Query: 610 QLFGEILGIWFYAETQKMCEAKPLQIVELGSRKSNITN*YVE-GSQXKLAIHHTILSIHL 786
           Q+FGE+LGIWF +E     ++   Q+VELG  +  +    +   +Q    + +  +S+HL
Sbjct: 95  QIFGELLGIWFISEWMATGKSTAFQLVELGPGRGTLVGDILRVFTQLGSVLKNCDISVHL 154

Query: 787 VEISSTMQSIQANRLCVSHRPVE 855
           VE+S  +  IQA  L     P+E
Sbjct: 155 VEVSQKLSEIQALTLTKEKVPLE 177


>AC007390-2|AAY14816.1|  441|Homo sapiens unknown protein.
          Length = 441

 Score =  118 bits (283), Expect = 4e-26
 Identities = 59/143 (41%), Positives = 86/143 (60%), Gaps = 1/143 (0%)
 Frame = +1

Query: 430 PTPESAPNLIEIIKEKIRLNGPITVAEYMHIVTTNPTEGYYMKKEVIGEAGDFITSPEIS 609
           P       ++  +  KI+  GPITVAEYM  V TNP +GYY+ ++++GE GDFITSPEIS
Sbjct: 35  PAENPVTPMLRHLMYKIKSTGPITVAEYMKEVLTNPAKGYYVYRDMLGEKGDFITSPEIS 94

Query: 610 QLFGEILGIWFYAETQKMCEAKPLQIVELGSRKSNITN*YVE-GSQXKLAIHHTILSIHL 786
           Q+FGE+LGIWF +E     ++   Q+VELG  +  +    +   +Q    + +  +S+HL
Sbjct: 95  QIFGELLGIWFISEWMATGKSTAFQLVELGPGRGTLVGDILRVFTQLGSVLKNCDISVHL 154

Query: 787 VEISSTMQSIQANRLCVSHRPVE 855
           VE+S  +  IQA  L     P+E
Sbjct: 155 VEVSQKLSEIQALTLTKEKVPLE 177


>BX538031-1|CAD97976.1|  343|Homo sapiens hypothetical protein
           protein.
          Length = 343

 Score = 34.7 bits (76), Expect = 0.48
 Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
 Frame = +1

Query: 430 PTPESAPNLIEIIKEKIRLNGPITVAEYMHIVTTNPTEGYYMKKEVIGEAGDFITSPEIS 609
           P       ++  +  KI+  GPITVAEYM              KEV+       T+P   
Sbjct: 35  PAENPVTPMLRHLMYKIKSTGPITVAEYM--------------KEVL-------TNP--- 70

Query: 610 QLFGEILGIWFYAETQKMCEAKPLQIVELGSRKSNITN*YVE-GSQXKLAIHHTILSIHL 786
               ++LGIWF +E     ++   Q+VELG  +  +    +   +Q    + +  +S+HL
Sbjct: 71  ---AKLLGIWFISEWMATGKSTAFQLVELGPGRGTLVGDILRVFTQLGSVLKNCDISVHL 127

Query: 787 VE 792
           VE
Sbjct: 128 VE 129


>BC019330-1|AAH19330.1|  529|Homo sapiens PODXL2 protein protein.
          Length = 529

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
 Frame = +1

Query: 400 KRPDPRTLKMPTPESAPNLIEIIKEKIRLNGPITVAEYMHIVTTNPTE-GYYMKKEVIGE 576
           + PD   L   T  S+P L+ +++E +  +G      + HI  + P+E   ++   ++GE
Sbjct: 319 EHPDEDPLGSRTSASSPQLLALVEEVLPRHGSGHHGAW-HISLSKPSEKEQHLLMTLVGE 377

Query: 577 AGDFITSPEISQLFGEI------LGIWFYAETQKMCEAKPLQI 687
            G  + + ++  + G+I      +GI  Y+ T   C+A+  Q+
Sbjct: 378 QG-VVPTQDVLSMLGDIRRSLEEIGIQNYSTTSS-CQARASQV 418


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,695,295
Number of Sequences: 237096
Number of extensions: 1793725
Number of successful extensions: 2774
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2754
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)