Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_L06
         (919 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47357-10|CAA87427.3|  426|Caenorhabditis elegans Hypothetical p...   100   3e-21
AC024757-5|AAK68430.1|  814|Caenorhabditis elegans Hypothetical ...    31   1.5  

>Z47357-10|CAA87427.3|  426|Caenorhabditis elegans Hypothetical
           protein ZK1128.1 protein.
          Length = 426

 Score = 99.5 bits (237), Expect = 3e-21
 Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 4/158 (2%)
 Frame = +1

Query: 376 REYSYKTIKRPDPRTLKMPTPESAPNLIEIIKEKIRLNGPITVAEYMHIVTTNPTEGYYM 555
           R+YS + +K P        +PE   +L + + +KIR++GPITVAEYM    + P  GYY 
Sbjct: 14  RQYSKQILKPPG-----YASPEKTNHLKKFLVDKIRVSGPITVAEYMKTCVSAPLVGYYG 68

Query: 556 K----KEVIGEAGDFITSPEISQLFGEILGIWFYAETQKMCEAKPLQIVELGSRKSNITN 723
           +    ++V G  GDFITSPE++QLFGE++G+W + E          Q+VELG  ++ + N
Sbjct: 69  QFSKDQKVFGAKGDFITSPELTQLFGEMIGVWVFHELANTGHKGSWQLVELGPGRAQLMN 128

Query: 724 *YVEGSQXKLAIHHTILSIHLVEISSTMQSIQANRLCV 837
              +        +   +S+HLVE S  +   Q   LC+
Sbjct: 129 ---DVLNALAKFNDKDVSVHLVETSDALIDEQEKSLCI 163


>AC024757-5|AAK68430.1|  814|Caenorhabditis elegans Hypothetical
           protein Y37E11AL.8 protein.
          Length = 814

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +1

Query: 391 KTIKRPDPRTLKMPTPESAPNLIEIIKEKIRLNGPITVA 507
           K +++ DP  +K+  P   P+L ++I+    L G +T A
Sbjct: 75  KCVEKQDPAEIKVSAPRPTPSLDDVIERSPELLGSLTTA 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,933,364
Number of Sequences: 27780
Number of extensions: 296948
Number of successful extensions: 740
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)