Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_L05
         (895 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41021-5|AAA82335.2|  652|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AY887908-1|AAX34420.1|  652|Caenorhabditis elegans anion transpo...    30   1.9  
U40798-9|AAY86274.1|  226|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF026204-3|AAB71253.1|  424|Caenorhabditis elegans Hypothetical ...    29   5.9  

>U41021-5|AAA82335.2|  652|Caenorhabditis elegans Hypothetical
           protein F14D12.5 protein.
          Length = 652

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 209 HFTSISHGLHRLS*NCHRTNTATTSTVSLALFF 111
           H+ S+ H +  +  NCH++NTAT    + AL F
Sbjct: 211 HWFSLVHSILDIFENCHKSNTATLCISASALVF 243


>AY887908-1|AAX34420.1|  652|Caenorhabditis elegans anion
           transporter SULP-2 protein.
          Length = 652

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -3

Query: 209 HFTSISHGLHRLS*NCHRTNTATTSTVSLALFF 111
           H+ S+ H +  +  NCH++NTAT    + AL F
Sbjct: 211 HWFSLVHSILDIFENCHKSNTATLCISASALVF 243


>U40798-9|AAY86274.1|  226|Caenorhabditis elegans Hypothetical
           protein R13A1.10 protein.
          Length = 226

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 181 CNPWLMD-VKCDSFTCNHKFNSNV*DRSE 264
           C  +L D V C+SF  NH FNSN    SE
Sbjct: 23  CETFLKDNVICNSFKTNHMFNSNFLQASE 51


>Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical
           protein F28D1.7 protein.
          Length = 143

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/22 (59%), Positives = 19/22 (86%), Gaps = 2/22 (9%)
 Frame = -2

Query: 351 LLERIGIKAKQPNS--KKSVRI 292
           +LE+IG++AKQPNS  +K VR+
Sbjct: 51  VLEKIGVEAKQPNSAIRKCVRV 72


>AF026204-3|AAB71253.1|  424|Caenorhabditis elegans Hypothetical
           protein C30E1.8 protein.
          Length = 424

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -2

Query: 324 KQPNSKKSVRITTLALTAVGFTSVSHVRVKLMVACKTV 211
           +QP + +SV I T A + +  T+ S V VKL+V+  T+
Sbjct: 293 QQPQTTQSVVIQTTATSTIQTTTKSTVNVKLIVSTVTL 330


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,329,908
Number of Sequences: 27780
Number of extensions: 231125
Number of successful extensions: 415
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)