Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_L05
         (895 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   1.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.8  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   6.6  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   8.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -2

Query: 216 TVTFYVHKPWVASSVIELSQNKHCH 142
           T+T Y H+  +  S++E S+NK+C+
Sbjct: 73  TITSY-HRINLKCSLVEFSENKNCN 96


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -2

Query: 360  YPSLLERIGIKAKQPNSKKSVRITTLALTAVGFTSVSHVRVKLM 229
            Y    ER G+   +     + R+T   LTA+G T V H + K+M
Sbjct: 939  YAESFERSGVTTLEA----AARVTVQELTALGVTLVGHQK-KIM 977


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 233 LWLHVKLSHFTSISHGLHR 177
           +WL   L  F  IS GLHR
Sbjct: 149 VWLLAGLISFVPISLGLHR 167


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 12/41 (29%), Positives = 16/41 (39%)
 Frame = -2

Query: 438 CRSRVGRXXXXXXXXXXXXATPICCGYPSLLERIGIKAKQP 316
           C + VGR              P+    P++L RIGI    P
Sbjct: 352 CVNYVGRKRPMHNVVYRPGENPVTQRLPAVLSRIGIILASP 392


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,021
Number of Sequences: 438
Number of extensions: 3157
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)