Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_L03
         (889 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    26   0.53 
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    26   0.53 
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    26   0.53 
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    26   0.53 
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    26   0.53 
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    26   0.53 
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    26   0.53 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.7  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   3.7  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   4.9  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   8.6  

>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +3

Query: 330 LKRSYHYLLSASYFNNYQTNRXRIREALQXNYRTIRGRKPLVS*STSLRGVGRWTS 497
           L  +Y Y    +Y NNY TN  +++     N   I    P+   +   R +G W S
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPPRPMGPWIS 140


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +3

Query: 330 LKRSYHYLLSASYFNNYQTNRXRIREALQXNYRTIRGRKPLVS*STSLRGVGRWTS 497
           L  +Y Y    +Y NNY TN  +++     N   I    P+   +   R +G W S
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPPRPMGPWIS 140


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +3

Query: 330 LKRSYHYLLSASYFNNYQTNRXRIREALQXNYRTIRGRKPLVS*STSLRGVGRWTS 497
           L  +Y Y    +Y NNY TN  +++     N   I    P+   +   R +G W S
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPPRPMGPWIS 140


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +3

Query: 330 LKRSYHYLLSASYFNNYQTNRXRIREALQXNYRTIRGRKPLVS*STSLRGVGRWTS 497
           L  +Y Y    +Y NNY TN  +++     N   I    P+   +   R +G W S
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPPRPMGPWIS 140


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +3

Query: 330 LKRSYHYLLSASYFNNYQTNRXRIREALQXNYRTIRGRKPLVS*STSLRGVGRWTS 497
           L  +Y Y    +Y NNY TN  +++     N   I    P+   +   R +G W S
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPPRPMGPWIS 140


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +3

Query: 330 LKRSYHYLLSASYFNNYQTNRXRIREALQXNYRTIRGRKPLVS*STSLRGVGRWTS 497
           L  +Y Y    +Y NNY TN  +++     N   I    P+   +   R +G W S
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPPRPMGPWIS 140


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +3

Query: 330 LKRSYHYLLSASYFNNYQTNRXRIREALQXNYRTIRGRKPLVS*STSLRGVGRWTS 497
           L  +Y Y    +Y NNY TN  +++     N   I    P+   +   R +G W S
Sbjct: 85  LSNNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPPRPMGPWIS 140


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 15/71 (21%), Positives = 30/71 (42%)
 Frame = +3

Query: 240 LSLPHCSAYYGQFKDNHVVANELKALASLYLKRSYHYLLSASYFNNYQTNRXRIREALQX 419
           L  P   +  G F+  + +  +L  +      +  HYL + S   NY   + +++EA   
Sbjct: 541 LGKPSRISKQGLFRRFYNLLGKLSTIEDADKNQCRHYLDAKSSVQNYSLAKHQLKEAFVK 600

Query: 420 NYRTIRGRKPL 452
            +     +KP+
Sbjct: 601 AHLGSWVKKPI 611


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +3

Query: 330 LKRSYHYLLSAS-YFNNYQTNRXRIREALQXNYRTIRGRKPLVS*STSLRGVGRWTS 497
           L  +Y+Y  + + Y NNY TN  +++     N   I    P+   +   R +G W S
Sbjct: 88  LSNNYNYNNNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCGNFPPRPMGPWIS 144


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 197 RLMLSERRPRMQTDFKSAAL 256
           RL   +RR RM+ D+K  AL
Sbjct: 407 RLAEQDRRERMEFDWKQVAL 426


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +3

Query: 333 KRSYHYLLSASYFNNYQTNRXRIREALQXNYRTI 434
           ++S  + + +S  NNY  N    ++    NYR +
Sbjct: 74  EKSKEHKIISSLSNNYNYNNNNYKKLYCNNYRKL 107


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,647
Number of Sequences: 438
Number of extensions: 4486
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)