Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_L01
         (953 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0095 - 20030237-20031711,20031731-20033057                       33   0.44 
08_02_1509 + 27611628-27611810,27611890-27612903,27612996-276139...    30   2.4  
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188     30   2.4  
11_04_0406 - 17334172-17334537,17334803-17334887,17334892-17335091     28   9.5  
04_04_0315 - 24331996-24332853                                         28   9.5  
01_06_1833 + 40208360-40208587,40208677-40209024,40209101-40209676     28   9.5  

>11_06_0095 - 20030237-20031711,20031731-20033057
          Length = 933

 Score = 32.7 bits (71), Expect = 0.44
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = -2

Query: 565 NIWS-ELVQYRLGAVVEELIGVGHVVHVDLDEGPHRRPPHHSNVIEPGRSTSSWSMKSRI 389
           ++W+ E +    GA+V  L G   +V   +DE  H   P+    +EP     SW +  + 
Sbjct: 298 DVWAPEAISNLFGALVSNLRGSRVLVTTRIDEVTHLAFPNKRIRLEPLSQNDSWELFYKA 357

Query: 388 QVPRNMAMTMP 356
             PR   +  P
Sbjct: 358 AFPREKKLECP 368


>08_02_1509 +
           27611628-27611810,27611890-27612903,27612996-27613978,
           27614079-27614352
          Length = 817

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
 Frame = -2

Query: 715 AQHWYV-GHDDRIVVHPVAHLRLEGVRPLVVEGQRAILVVCYVDLLPLFRVNIWSELVQY 539
           A+ +Y+  H D + + P+  + L+ +  + ++    ILV  +  L  L R N  S + Q 
Sbjct: 2   ARSYYICSHIDPLALSPIPGIALDTLFLVAIQALAVILVSKFFHLF-LRRYNQPSVISQI 60

Query: 538 RLGAVVEELIGVGHVVHVDLD 476
             G VV  +     +VHVD+D
Sbjct: 61  LAGVVVGGMGLRSAIVHVDVD 81


>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
          Length = 216

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -2

Query: 538 RLGAVVEELIGVGHVVHVDLDEGPHRRPPHHS 443
           R+   +EE+     VV VD+  G H+RPPH S
Sbjct: 17  RILVCLEEVGAEYEVVPVDMSTGEHKRPPHIS 48


>11_04_0406 - 17334172-17334537,17334803-17334887,17334892-17335091
          Length = 216

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -2

Query: 850 ANASTXXPQTADRRHLDKRLDLQYVHDGSHGETQEPSGVLRL 725
           A AS+  P T  RRH    LDL +  D   GE +  +G  R+
Sbjct: 2   AVASSELPSTERRRHYKALLDLGWEGDWGSGEFEGENGNRRI 43


>04_04_0315 - 24331996-24332853
          Length = 285

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 335 SSHPTPPRHSHCHIPR 382
           S  P PPRH H HIP+
Sbjct: 43  SPSPLPPRHRHRHIPK 58


>01_06_1833 + 40208360-40208587,40208677-40209024,40209101-40209676
          Length = 383

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = -2

Query: 676 VHPVAHLRLEGVRPLVVEGQRAILVVCYVDLLPLFRVNIWSEL-VQYRLGAVVEELIGVG 500
           +HP  +L L  V  L + G ++ +   Y+DL       +WS+L +Q R   +V E  GV 
Sbjct: 152 IHPHCYLLLPEVAGLDLSGAKSYMTKDYLDL-------VWSKLKLQQRASMIVGETRGVD 204

Query: 499 HVVH 488
              H
Sbjct: 205 DEEH 208


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,929,913
Number of Sequences: 37544
Number of extensions: 359779
Number of successful extensions: 1114
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2752963900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)