Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_L01
(953 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22555-1|CAA80277.1| 509|Homo sapiens CLA-1 protein. 81 8e-15
BC112037-1|AAI12038.1| 509|Homo sapiens scavenger receptor clas... 79 2e-14
BC093732-1|AAH93732.1| 509|Homo sapiens scavenger receptor clas... 79 2e-14
BC080647-1|AAH80647.1| 509|Homo sapiens scavenger receptor clas... 79 2e-14
AB209436-1|BAD92673.1| 581|Homo sapiens Scavenger receptor clas... 79 2e-14
AF515445-1|AAQ08185.1| 474|Homo sapiens scavenger receptor clas... 78 5e-14
D12676-1|BAA02177.1| 478|Homo sapiens 85kDa lysosomal sialoglyc... 58 6e-08
BT006939-1|AAP35585.1| 478|Homo sapiens scavenger receptor clas... 58 6e-08
BC021892-1|AAH21892.1| 478|Homo sapiens scavenger receptor clas... 58 6e-08
AL358135-4|CAI13532.1| 589|Homo sapiens runt-related transcript... 31 4.7
AL358135-3|CAI13531.1| 521|Homo sapiens runt-related transcript... 31 4.7
AL358135-2|CAI13528.1| 507|Homo sapiens runt-related transcript... 31 4.7
AL161907-4|CAI19641.1| 589|Homo sapiens runt-related transcript... 31 4.7
AL161907-3|CAI19639.1| 521|Homo sapiens runt-related transcript... 31 4.7
AL161907-2|CAI19638.1| 507|Homo sapiens runt-related transcript... 31 4.7
AL096865-5|CAI19932.1| 589|Homo sapiens runt-related transcript... 31 4.7
AL096865-4|CAI19931.1| 521|Homo sapiens runt-related transcript... 31 4.7
AL096865-2|CAI19925.1| 507|Homo sapiens runt-related transcript... 31 4.7
AF001450-2|AAB65158.1| 507|Homo sapiens core binding factor alp... 31 4.7
AF001450-1|AAB65159.2| 521|Homo sapiens core binding factor alp... 31 4.7
L40992-1|AAA89072.1| 440|Homo sapiens core-binding factor, runt... 31 8.2
AL358135-1|CAI13529.1| 440|Homo sapiens runt-related transcript... 31 8.2
AL161907-1|CAI19637.1| 440|Homo sapiens runt-related transcript... 31 8.2
AL096865-1|CAI19926.1| 440|Homo sapiens runt-related transcript... 31 8.2
>Z22555-1|CAA80277.1| 509|Homo sapiens CLA-1 protein.
Length = 509
Score = 80.6 bits (190), Expect = 8e-15
Identities = 44/107 (41%), Positives = 59/107 (55%)
Frame = +2
Query: 482 VYVYNVTNADEFLNNGSKPILDELGPYVYSEEWEKINITDNENGTLSFHYKRTYTFQPEM 661
VY ++V N E L G KP + E GPYVY E K NIT N N T+SF RT+ FQP
Sbjct: 67 VYFFDVMNPSEILK-GEKPQVRERGPYVYRESRHKSNITFNNNDTVSFLEYRTFQFQPSK 125
Query: 662 SNGMDDDAVVVPNIPMLSATSQSKHAARFLRLAMASIMDILKIKPFV 802
S+G + D +V+PNI +L A ++ L+L M L + F+
Sbjct: 126 SHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFM 172
>BC112037-1|AAI12038.1| 509|Homo sapiens scavenger receptor class
B, member 1 protein.
Length = 509
Score = 79.4 bits (187), Expect = 2e-14
Identities = 44/107 (41%), Positives = 59/107 (55%)
Frame = +2
Query: 482 VYVYNVTNADEFLNNGSKPILDELGPYVYSEEWEKINITDNENGTLSFHYKRTYTFQPEM 661
VY ++V N E L G KP + E GPYVY E K NIT N N T+SF RT+ FQP
Sbjct: 67 VYFFDVMNPSEILK-GEKPQVRERGPYVYREFRHKSNITFNNNDTVSFLEYRTFQFQPSK 125
Query: 662 SNGMDDDAVVVPNIPMLSATSQSKHAARFLRLAMASIMDILKIKPFV 802
S+G + D +V+PNI +L A ++ L+L M L + F+
Sbjct: 126 SHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFM 172
>BC093732-1|AAH93732.1| 509|Homo sapiens scavenger receptor class
B, member 1 protein.
Length = 509
Score = 79.4 bits (187), Expect = 2e-14
Identities = 44/107 (41%), Positives = 59/107 (55%)
Frame = +2
Query: 482 VYVYNVTNADEFLNNGSKPILDELGPYVYSEEWEKINITDNENGTLSFHYKRTYTFQPEM 661
VY ++V N E L G KP + E GPYVY E K NIT N N T+SF RT+ FQP
Sbjct: 67 VYFFDVMNPSEILK-GEKPQVRERGPYVYREFRHKSNITFNNNDTVSFLEYRTFQFQPSK 125
Query: 662 SNGMDDDAVVVPNIPMLSATSQSKHAARFLRLAMASIMDILKIKPFV 802
S+G + D +V+PNI +L A ++ L+L M L + F+
Sbjct: 126 SHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFM 172
>BC080647-1|AAH80647.1| 509|Homo sapiens scavenger receptor class
B, member 1 protein.
Length = 509
Score = 79.4 bits (187), Expect = 2e-14
Identities = 44/107 (41%), Positives = 59/107 (55%)
Frame = +2
Query: 482 VYVYNVTNADEFLNNGSKPILDELGPYVYSEEWEKINITDNENGTLSFHYKRTYTFQPEM 661
VY ++V N E L G KP + E GPYVY E K NIT N N T+SF RT+ FQP
Sbjct: 67 VYFFDVMNPSEILK-GEKPQVRERGPYVYREFRHKSNITFNNNDTVSFLEYRTFQFQPSK 125
Query: 662 SNGMDDDAVVVPNIPMLSATSQSKHAARFLRLAMASIMDILKIKPFV 802
S+G + D +V+PNI +L A ++ L+L M L + F+
Sbjct: 126 SHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFM 172
>AB209436-1|BAD92673.1| 581|Homo sapiens Scavenger receptor class B
member 1 variant protein.
Length = 581
Score = 79.4 bits (187), Expect = 2e-14
Identities = 44/107 (41%), Positives = 59/107 (55%)
Frame = +2
Query: 482 VYVYNVTNADEFLNNGSKPILDELGPYVYSEEWEKINITDNENGTLSFHYKRTYTFQPEM 661
VY ++V N E L G KP + E GPYVY E K NIT N N T+SF RT+ FQP
Sbjct: 95 VYFFDVMNPSEILK-GEKPQVRERGPYVYREFRHKSNITFNNNDTVSFLEYRTFQFQPSK 153
Query: 662 SNGMDDDAVVVPNIPMLSATSQSKHAARFLRLAMASIMDILKIKPFV 802
S+G + D +V+PNI +L A ++ L+L M L + F+
Sbjct: 154 SHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFM 200
>AF515445-1|AAQ08185.1| 474|Homo sapiens scavenger receptor class B
type III protein.
Length = 474
Score = 77.8 bits (183), Expect = 5e-14
Identities = 44/107 (41%), Positives = 58/107 (54%)
Frame = +2
Query: 482 VYVYNVTNADEFLNNGSKPILDELGPYVYSEEWEKINITDNENGTLSFHYKRTYTFQPEM 661
VY +V N E L G KP + E GPYVY E K NIT N N T+SF RT+ FQP
Sbjct: 32 VYFLDVMNPSEILK-GEKPQVRERGPYVYREFRHKSNITFNNNDTVSFLEYRTFQFQPSK 90
Query: 662 SNGMDDDAVVVPNIPMLSATSQSKHAARFLRLAMASIMDILKIKPFV 802
S+G + D +V+PNI +L A ++ L+L M L + F+
Sbjct: 91 SHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFM 137
>D12676-1|BAA02177.1| 478|Homo sapiens 85kDa lysosomal
sialoglycoprotein protein.
Length = 478
Score = 57.6 bits (133), Expect = 6e-08
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 485 YVYNVTNADEFLNNGSKPILDELGPYVYSEEWEKINITDNENG-TLSFHYKRTYTFQPEM 661
Y +NVTN +E L G P ++E+GPY Y E K NI +NG T+S + Y F+ +
Sbjct: 65 YFFNVTNPEEILR-GETPRVEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFERDQ 123
Query: 662 SNGMDD-DAVVVPNIPMLSATSQSKHAARFLRLAMASIMDILKIKPFV 802
S G D + NIP+L+ S+ FLR + +++ + K FV
Sbjct: 124 SVGDPKIDLIRTLNIPVLTVIEWSQ--VHFLREIIEAMLKAYQQKLFV 169
>BT006939-1|AAP35585.1| 478|Homo sapiens scavenger receptor class
B, member 2 protein.
Length = 478
Score = 57.6 bits (133), Expect = 6e-08
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 485 YVYNVTNADEFLNNGSKPILDELGPYVYSEEWEKINITDNENG-TLSFHYKRTYTFQPEM 661
Y +NVTN +E L G P ++E+GPY Y E K NI +NG T+S + Y F+ +
Sbjct: 65 YFFNVTNPEEILR-GETPRVEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFERDQ 123
Query: 662 SNGMDD-DAVVVPNIPMLSATSQSKHAARFLRLAMASIMDILKIKPFV 802
S G D + NIP+L+ S+ FLR + +++ + K FV
Sbjct: 124 SVGDPKIDLIRTLNIPVLTVIEWSQ--VHFLREIIEAMLKAYQQKLFV 169
>BC021892-1|AAH21892.1| 478|Homo sapiens scavenger receptor class
B, member 2 protein.
Length = 478
Score = 57.6 bits (133), Expect = 6e-08
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +2
Query: 485 YVYNVTNADEFLNNGSKPILDELGPYVYSEEWEKINITDNENG-TLSFHYKRTYTFQPEM 661
Y +NVTN +E L G P ++E+GPY Y E K NI +NG T+S + Y F+ +
Sbjct: 65 YFFNVTNPEEILR-GETPRVEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFERDQ 123
Query: 662 SNGMDD-DAVVVPNIPMLSATSQSKHAARFLRLAMASIMDILKIKPFV 802
S G D + NIP+L+ S+ FLR + +++ + K FV
Sbjct: 124 SVGDPKIDLIRTLNIPVLTVIEWSQ--VHFLREIIEAMLKAYQQKLFV 169
>AL358135-4|CAI13532.1| 589|Homo sapiens runt-related transcription
factor 2 protein.
Length = 589
Score = 31.5 bits (68), Expect = 4.7
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 LNNGSKPILDELGPYVYSEEWEKIN-ITDNENGTLSFHYKRTYTFQPEMSNGM 673
L+ S+ ELGP+ ++ I+ +T++ HY T+T+ P +++GM
Sbjct: 424 LSKKSQAGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGM 476
>AL358135-3|CAI13531.1| 521|Homo sapiens runt-related transcription
factor 2 protein.
Length = 521
Score = 31.5 bits (68), Expect = 4.7
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 LNNGSKPILDELGPYVYSEEWEKIN-ITDNENGTLSFHYKRTYTFQPEMSNGM 673
L+ S+ ELGP+ ++ I+ +T++ HY T+T+ P +++GM
Sbjct: 356 LSKKSQAGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGM 408
>AL358135-2|CAI13528.1| 507|Homo sapiens runt-related transcription
factor 2 protein.
Length = 507
Score = 31.5 bits (68), Expect = 4.7
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 LNNGSKPILDELGPYVYSEEWEKIN-ITDNENGTLSFHYKRTYTFQPEMSNGM 673
L+ S+ ELGP+ ++ I+ +T++ HY T+T+ P +++GM
Sbjct: 342 LSKKSQAGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGM 394
>AL161907-4|CAI19641.1| 589|Homo sapiens runt-related transcription
factor 2 protein.
Length = 589
Score = 31.5 bits (68), Expect = 4.7
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 LNNGSKPILDELGPYVYSEEWEKIN-ITDNENGTLSFHYKRTYTFQPEMSNGM 673
L+ S+ ELGP+ ++ I+ +T++ HY T+T+ P +++GM
Sbjct: 424 LSKKSQAGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGM 476
>AL161907-3|CAI19639.1| 521|Homo sapiens runt-related transcription
factor 2 protein.
Length = 521
Score = 31.5 bits (68), Expect = 4.7
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 LNNGSKPILDELGPYVYSEEWEKIN-ITDNENGTLSFHYKRTYTFQPEMSNGM 673
L+ S+ ELGP+ ++ I+ +T++ HY T+T+ P +++GM
Sbjct: 356 LSKKSQAGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGM 408
>AL161907-2|CAI19638.1| 507|Homo sapiens runt-related transcription
factor 2 protein.
Length = 507
Score = 31.5 bits (68), Expect = 4.7
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 LNNGSKPILDELGPYVYSEEWEKIN-ITDNENGTLSFHYKRTYTFQPEMSNGM 673
L+ S+ ELGP+ ++ I+ +T++ HY T+T+ P +++GM
Sbjct: 342 LSKKSQAGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGM 394
>AL096865-5|CAI19932.1| 589|Homo sapiens runt-related transcription
factor 2 protein.
Length = 589
Score = 31.5 bits (68), Expect = 4.7
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 LNNGSKPILDELGPYVYSEEWEKIN-ITDNENGTLSFHYKRTYTFQPEMSNGM 673
L+ S+ ELGP+ ++ I+ +T++ HY T+T+ P +++GM
Sbjct: 424 LSKKSQAGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGM 476
>AL096865-4|CAI19931.1| 521|Homo sapiens runt-related transcription
factor 2 protein.
Length = 521
Score = 31.5 bits (68), Expect = 4.7
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 LNNGSKPILDELGPYVYSEEWEKIN-ITDNENGTLSFHYKRTYTFQPEMSNGM 673
L+ S+ ELGP+ ++ I+ +T++ HY T+T+ P +++GM
Sbjct: 356 LSKKSQAGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGM 408
>AL096865-2|CAI19925.1| 507|Homo sapiens runt-related transcription
factor 2 protein.
Length = 507
Score = 31.5 bits (68), Expect = 4.7
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 LNNGSKPILDELGPYVYSEEWEKIN-ITDNENGTLSFHYKRTYTFQPEMSNGM 673
L+ S+ ELGP+ ++ I+ +T++ HY T+T+ P +++GM
Sbjct: 342 LSKKSQAGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGM 394
>AF001450-2|AAB65158.1| 507|Homo sapiens core binding factor alpha1
subunit protein.
Length = 507
Score = 31.5 bits (68), Expect = 4.7
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 LNNGSKPILDELGPYVYSEEWEKIN-ITDNENGTLSFHYKRTYTFQPEMSNGM 673
L+ S+ ELGP+ ++ I+ +T++ HY T+T+ P +++GM
Sbjct: 342 LSKKSQAGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGM 394
>AF001450-1|AAB65159.2| 521|Homo sapiens core binding factor alpha1
subunit protein.
Length = 521
Score = 31.5 bits (68), Expect = 4.7
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 LNNGSKPILDELGPYVYSEEWEKIN-ITDNENGTLSFHYKRTYTFQPEMSNGM 673
L+ S+ ELGP+ ++ I+ +T++ HY T+T+ P +++GM
Sbjct: 356 LSKKSQAGASELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGM 408
>L40992-1|AAA89072.1| 440|Homo sapiens core-binding factor, runt
domain, alpha subunit 1 protein.
Length = 440
Score = 30.7 bits (66), Expect = 8.2
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 548 ELGPYVYSEEWEKIN-ITDNENGTLSFHYKRTYTFQPEMSNGM 673
ELGP+ ++ I+ +T++ HY T+T+ P +++GM
Sbjct: 285 ELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGM 327
>AL358135-1|CAI13529.1| 440|Homo sapiens runt-related transcription
factor 2 protein.
Length = 440
Score = 30.7 bits (66), Expect = 8.2
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 548 ELGPYVYSEEWEKIN-ITDNENGTLSFHYKRTYTFQPEMSNGM 673
ELGP+ ++ I+ +T++ HY T+T+ P +++GM
Sbjct: 285 ELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGM 327
>AL161907-1|CAI19637.1| 440|Homo sapiens runt-related transcription
factor 2 protein.
Length = 440
Score = 30.7 bits (66), Expect = 8.2
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 548 ELGPYVYSEEWEKIN-ITDNENGTLSFHYKRTYTFQPEMSNGM 673
ELGP+ ++ I+ +T++ HY T+T+ P +++GM
Sbjct: 285 ELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGM 327
>AL096865-1|CAI19926.1| 440|Homo sapiens runt-related transcription
factor 2 protein.
Length = 440
Score = 30.7 bits (66), Expect = 8.2
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 548 ELGPYVYSEEWEKIN-ITDNENGTLSFHYKRTYTFQPEMSNGM 673
ELGP+ ++ I+ +T++ HY T+T+ P +++GM
Sbjct: 285 ELGPFSDPRQFPSISSLTESRFSNPRMHYPATFTYTPPVTSGM 327
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,386,249
Number of Sequences: 237096
Number of extensions: 1841269
Number of successful extensions: 6003
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 5726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5997
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12603135794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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