Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_L01
         (953 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98866-17|CAB11566.3|  534|Caenorhabditis elegans Hypothetical p...    50   2e-06
Z81115-6|CAD45598.1|  630|Caenorhabditis elegans Hypothetical pr...    46   4e-05
AL032658-6|CAA21747.2|  630|Caenorhabditis elegans Hypothetical ...    46   4e-05
Z54270-3|CAA91027.2|  560|Caenorhabditis elegans Hypothetical pr...    42   7e-04
Z72506-4|CAA96619.1|  590|Caenorhabditis elegans Hypothetical pr...    41   0.002
U39744-3|AAK18884.2|  563|Caenorhabditis elegans Hypothetical pr...    39   0.005
Z48621-2|CAA88547.1|  536|Caenorhabditis elegans Hypothetical pr...    38   0.011
Z82260-10|CAB05138.1|  361|Caenorhabditis elegans Hypothetical p...    31   1.2  
U41007-15|AAQ01538.1|  564|Caenorhabditis elegans Kinesin-like p...    31   1.6  
U41007-14|AAA82277.1|  690|Caenorhabditis elegans Kinesin-like p...    31   1.6  
AB023577-1|BAB82459.1|  690|Caenorhabditis elegans Kinesin like ...    31   1.6  

>Z98866-17|CAB11566.3|  534|Caenorhabditis elegans Hypothetical
           protein Y49E10.20 protein.
          Length = 534

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
 Frame = +2

Query: 482 VYVYNVTNADEFLNNGSKPILDELGPYVYSEEWEKINITDNENGTLSFH-YKRTYTFQPE 658
           ++++NVTN D  L    KP L E+GP+V+ E  EK+     +N T  F+  ++ Y F   
Sbjct: 76  IWMFNVTNVDGILKRHEKPNLHEIGPFVFDEVQEKVYHRFADNDTRVFYKNQKLYHFNKN 135

Query: 659 MS--NGMDDDAVVVPNI---PMLSATSQSKHAARFLRLAMASIMDILKIKPFVEV 808
            S      D  V +PNI    ++ A   +    R ++ A+ S++ ++   P++ V
Sbjct: 136 ASCPTCHLDMKVTIPNIVFQKLIDAADVTIFGVR-IKFAIESVLKMVSEAPYITV 189


>Z81115-6|CAD45598.1|  630|Caenorhabditis elegans Hypothetical
           protein Y76A2B.6 protein.
          Length = 630

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 23/61 (37%), Positives = 35/61 (57%)
 Frame = +2

Query: 482 VYVYNVTNADEFLNNGSKPILDELGPYVYSEEWEKINITDNENGTLSFHYKRTYTFQPEM 661
           +YVY+  N DEF+ NG+ P +   GPYV+ ++ E   +   ENGT+ +    TY F  + 
Sbjct: 94  MYVYSTKNPDEFM-NGAIPEVTGSGPYVFDKKMEN-RVVSAENGTVKYRRFFTYNFNEQE 151

Query: 662 S 664
           S
Sbjct: 152 S 152


>AL032658-6|CAA21747.2|  630|Caenorhabditis elegans Hypothetical
           protein Y76A2B.6 protein.
          Length = 630

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 23/61 (37%), Positives = 35/61 (57%)
 Frame = +2

Query: 482 VYVYNVTNADEFLNNGSKPILDELGPYVYSEEWEKINITDNENGTLSFHYKRTYTFQPEM 661
           +YVY+  N DEF+ NG+ P +   GPYV+ ++ E   +   ENGT+ +    TY F  + 
Sbjct: 94  MYVYSTKNPDEFM-NGAIPEVTGSGPYVFDKKMEN-RVVSAENGTVKYRRFFTYNFNEQE 151

Query: 662 S 664
           S
Sbjct: 152 S 152


>Z54270-3|CAA91027.2|  560|Caenorhabditis elegans Hypothetical
           protein F11C1.3 protein.
          Length = 560

 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = +2

Query: 485 YVYNVTNADEFLNNGSKPILDELGPYVYSEEWEK--INITDNENGTLSFHYKRTYTFQPE 658
           +++NVTN DE L  G+ P + E+GPY Y+E   K      DN+N  + +   +T+ + P 
Sbjct: 69  HLFNVTNPDEVLYYGATPNMLEIGPYTYTETEFKDFTQFRDNDN-EIFYVNNKTWVYDPT 127

Query: 659 MS 664
            S
Sbjct: 128 RS 129


>Z72506-4|CAA96619.1|  590|Caenorhabditis elegans Hypothetical
           protein F07A5.3 protein.
          Length = 590

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
 Frame = +2

Query: 479 KVYVYNVTNADEFLNNGSKPILDELGPY--VYSEEWEKINITDNENGTLSFHYKRTYTFQ 652
           K Y +NVTN DE     + P L E+GP+  + SE+ + +  +D+++     +YK+    +
Sbjct: 71  KFYFFNVTNPDEVKYYSAAPNLVEIGPFSVMESEQKKYLEFSDDKSQMFYQNYKKYILSK 130

Query: 653 PEMSNGMD-DDAVVVPNIPMLSATS 724
                  D D  +V PN P L A +
Sbjct: 131 DYSCEDCDWDRNIVFPNPPGLGAVA 155


>U39744-3|AAK18884.2|  563|Caenorhabditis elegans Hypothetical
           protein C03F11.3 protein.
          Length = 563

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
 Frame = +2

Query: 485 YVYNVTNADEFLNNGSKPILDELGPYVYSEEWEKINITDNENGT-LSFHYKRTYTFQPEM 661
           +VY+ TN    +N    P + E GPY + E      +  +ENG  + F   +T+ F P  
Sbjct: 75  WVYDYTNTIGIMNRAIYPDVREKGPYAFDEILTMDKLNFSENGEFMEFRQIQTFVFNPNK 134

Query: 662 S-NGMD--DDAVVVPNI 703
           S  G D   D V++P++
Sbjct: 135 SCAGCDPYKDKVLIPDM 151


>Z48621-2|CAA88547.1|  536|Caenorhabditis elegans Hypothetical
           protein R07B1.3 protein.
          Length = 536

 Score = 37.9 bits (84), Expect = 0.011
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
 Frame = +2

Query: 479 KVYVYNVTNADEFLNNGSKPILDELGPYVYSEEWEKINITDNENGTLSFH--YKRTYTFQ 652
           K  ++NVTN DE    G+KP L E+G Y + E  +K     + + T  F+  YK+ +  +
Sbjct: 68  KFNLFNVTNPDEVKYLGAKPELIEVGGYAFLESEQKKYYEFSSDKTKMFYQNYKQYHYSE 127

Query: 653 PEMSNGMD-DDAVVVPN 700
            +   G + +D ++ PN
Sbjct: 128 VDNDAGYNYNDKIMFPN 144


>Z82260-10|CAB05138.1|  361|Caenorhabditis elegans Hypothetical
           protein C32H11.12 protein.
          Length = 361

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +2

Query: 485 YVYNVTNADEFLNNGSKPILDELGPYVYSEEWEKINI-TDNENGTLS-FHYKRTYTFQPE 658
           Y+Y  +   E L N      D+  PY++     KINI TDN N  ++ F +K  Y+  P 
Sbjct: 85  YLYFPSRKIELLQN------DDYNPYIFPSPMVKINIGTDNRNDVMNQFGFKVVYSKYPT 138

Query: 659 MSNGM 673
           +   +
Sbjct: 139 LEKNI 143


>U41007-15|AAQ01538.1|  564|Caenorhabditis elegans Kinesin-like
           protein protein 10,isoform b protein.
          Length = 564

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -2

Query: 538 RLGAVVEELIGVGHVVHVDLDEGPHRRPPHH 446
           RLGA  E L+  G VV +D D G  R   HH
Sbjct: 16  RLGASSESLVVGGRVVTIDTDNGSKRYELHH 46


>U41007-14|AAA82277.1|  690|Caenorhabditis elegans Kinesin-like
           protein protein 10,isoform a protein.
          Length = 690

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -2

Query: 538 RLGAVVEELIGVGHVVHVDLDEGPHRRPPHH 446
           RLGA  E L+  G VV +D D G  R   HH
Sbjct: 16  RLGASSESLVVGGRVVTIDTDNGSKRYELHH 46


>AB023577-1|BAB82459.1|  690|Caenorhabditis elegans Kinesin like
           protein protein.
          Length = 690

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -2

Query: 538 RLGAVVEELIGVGHVVHVDLDEGPHRRPPHH 446
           RLGA  E L+  G VV +D D G  R   HH
Sbjct: 16  RLGASSESLVVGGRVVTIDTDNGSKRYELHH 46


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,584,803
Number of Sequences: 27780
Number of extensions: 287216
Number of successful extensions: 839
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)