Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_K21
(959 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 31 0.93
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.93
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.93
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.93
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 30 2.1
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 30 2.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.7
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 29 3.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.9
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +1
Query: 766 PPQEXKKXSXGXSPXEXPPXXPXLFSXPXPXFPXXXXPPLFPPXXEXGXP 915
PP K + G SP PP P + P P P PP+ PP + P
Sbjct: 125 PPPPRKSRAGGSSPPPPPP--PRVPRTPPPRSPPPRRPPMTPPSPQRRPP 172
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -1
Query: 935 GGXXXKRGXPXSXKGGKRGGXXXXGKXGXGXEKRXGXXGGFSXG 804
GG RG +GG RGG G+ G G R GG G
Sbjct: 10 GGGGGFRGGRGGDRGGSRGGFGGGGRGGYGGGDRGSFGGGDRGG 53
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.93
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 5/69 (7%)
Frame = +1
Query: 757 GANPPQEXKKXSXGXSPXEXPPXXPXLFSXPXPXFPXXXXPPLF-----PPXXEXGXPLF 921
G PP + G P P P + P P P PP+ PP G P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 922 XXXPPXXGF 948
PP GF
Sbjct: 772 PPPPPPGGF 780
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.93
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 5/69 (7%)
Frame = +1
Query: 757 GANPPQEXKKXSXGXSPXEXPPXXPXLFSXPXPXFPXXXXPPLF-----PPXXEXGXPLF 921
G PP + G P P P + P P P PP+ PP G P
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 922 XXXPPXXGF 948
PP GF
Sbjct: 772 PPPPPPGGF 780
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.93
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 5/69 (7%)
Frame = +1
Query: 757 GANPPQEXKKXSXGXSPXEXPPXXPXLFSXPXPXFPXXXXPPLF-----PPXXEXGXPLF 921
G PP + G P P P + P P P PP+ PP G P
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 922 XXXPPXXGF 948
PP GF
Sbjct: 355 PPPPPPGGF 363
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = -1
Query: 932 GXXXKRGXPXSXKGGKRGGXXXXGKXGXGXEKRXGXXGGFSXG 804
G R S GG RGG G+ G G G GG+ G
Sbjct: 5 GYGGSRSYGGSSGGGSRGGYGGGGRGGGGGGYSGGRGGGYGGG 47
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -1
Query: 935 GGXXXKRGXPXSXKGGKRGGXXXXGKXGXGXEKRXGXXGGFSXG 804
GG + G +GG RGG + G R G GGF G
Sbjct: 340 GGGGFRGGDRGGFRGGDRGGFRGGDRGGFRGGDRGGDRGGFRGG 383
Score = 28.7 bits (61), Expect = 6.5
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = -1
Query: 935 GGXXXKRGXPXSXK---GGKRGGXXXXGKXGXGXEKRXGXXGGFSXGE 801
GG RG P + GG RGG G G G + G GGF G+
Sbjct: 302 GGFGGGRGGPMGGRGGFGGDRGGYGGGGGRG-GFDGGRGGGGGFRGGD 348
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = -1
Query: 935 GGXXXKRGXPXSXKGGKRGGXXXXGKXGXGXEKRXGXXGGFSXGE 801
GG RG +GG RGG + G R G GG G+
Sbjct: 332 GGFDGGRGGGGGFRGGDRGGFRGGDRGGFRGGDRGGFRGGDRGGD 376
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/63 (26%), Positives = 20/63 (31%)
Frame = +1
Query: 766 PPQEXKKXSXGXSPXEXPPXXPXLFSXPXPXFPXXXXPPLFPPXXEXGXPLFXXXPPXXG 945
PP + P PP P F P P P PP PP P P
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPP-PPMCPPPPPPMPSYSPCQS 89
Query: 946 FSP 954
++P
Sbjct: 90 YAP 92
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +1
Query: 820 PXXPXLFSXPXPXFPXXXXPPLFPPXXEXGXPLFXXXPP 936
P P + + P P F PP F P P+ PP
Sbjct: 106 PPAPIIVNGPPPCFGPACPPPCFGPACAPSAPIIVNGPP 144
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = +1
Query: 820 PXXPXLFSXPXPXFPXXXXPPLFPPXXEXGXPLFXXXPP 936
P P + + P P F PP F P P+ PP
Sbjct: 78 PLAPIIVNGPPPCFGPACPPPCFGPACAPPAPIIVNGPP 116
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +1
Query: 805 PXEXPPXXPXLFSXPXPXFPXXXXPPLFPPXXEXGXPLFXXXPPXXGFSP 954
P PP P +F+ P P P PP G P PP GF P
Sbjct: 691 PAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPP-MGFDP 739
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,153,061
Number of Sequences: 27780
Number of extensions: 105355
Number of successful extensions: 209
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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