Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_K19
(910 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 36 0.053
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 34 0.12
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.16
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.16
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 32 0.49
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 32 0.49
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 0.86
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 31 1.1
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 31 1.5
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 31 1.5
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 1.5
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 30 2.0
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 3.5
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 4.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 4.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 6.1
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 6.1
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 6.1
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 6.1
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 28 8.0
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 28 8.0
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 28 8.0
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 28 8.0
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 28 8.0
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 35.5 bits (78), Expect = 0.053
Identities = 22/62 (35%), Positives = 22/62 (35%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
GG GGG G G GGF GG G N G GG GG Q
Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQG 114
Query: 721 GG 716
GG
Sbjct: 115 GG 116
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 795 PXXAXPXFLXPPPXXKXXPPXXXPLXXPSXPPPXP 899
P P F PPP PP P P PPP P
Sbjct: 48 PPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 795 PXXAXPXFLXPPPXXKXXPPXXXPLXXPSXPPPXPP 902
P P PPP PP P P PPP PP
Sbjct: 47 PPPICPPQFCPPPPM--CPPPPPPPPPPMCPPPPPP 80
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 34.3 bits (75), Expect = 0.12
Identities = 26/71 (36%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
GG GG G G GGF GGG G G + GG+R RGG +
Sbjct: 316 GGFGGDRGGYGGGGGRGGFDGGRGGGGGFRGGDRGGFRGGDRG-GFRGGDRGGFRGGDRG 374
Query: 721 G--GXFXXGGR 695
G G F GGR
Sbjct: 375 GDRGGF-RGGR 384
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = -1
Query: 901 GGXGGGXD--GXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGX 728
GG GG D G RG GGF GGG G R GG+R RGG
Sbjct: 74 GGQSGGSDPYGQSRGGGRGGFGGSRGGGGYDGGRGGSRGGYD-GGRGGYGGDRGG-RGGG 131
Query: 727 QXG 719
+ G
Sbjct: 132 RGG 134
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/69 (31%), Positives = 25/69 (36%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
G GGG RG GG+ GG G G RR GG R + +
Sbjct: 96 GSRGGGGYDGGRGGSRGGYDGGRGGYGGDRGGRGGGRGGYDGERR--GGSRWDDGNSDRQ 153
Query: 721 GGXFXXGGR 695
GG GGR
Sbjct: 154 GG--PPGGR 160
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.16
Identities = 24/104 (23%), Positives = 30/104 (28%)
Frame = -2
Query: 891 GAGGMGXXGGXXXGXFXXXGEGGXEKXXXXTXXXXXXRKXGGXXGGREXXREGATXGXGX 712
G GG GG G + G G + GG G G++ G
Sbjct: 229 GGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAG 288
Query: 711 FXXGGGKXAPGXXXKXXPVXGFXPXXXXLXGXNFFXRLXXGGGG 580
GGG AP P P + + GGGG
Sbjct: 289 SSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGG 332
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
GG GGG G G GG GGG G G GG GG
Sbjct: 137 GGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCG-----GGSSGGGGYAVAPSGGGGC 191
Query: 721 GGXFXXGG 698
GG GG
Sbjct: 192 GGGGSSGG 199
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
GG GGG G G GG GGG G ++ G GG GG
Sbjct: 111 GGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGG 170
Query: 721 GGXFXXGG 698
G GG
Sbjct: 171 CGGGSSGG 178
Score = 29.5 bits (63), Expect = 3.5
Identities = 28/109 (25%), Positives = 30/109 (27%)
Frame = -2
Query: 906 GXGXXGAGGMGXXGGXXXGXFXXXGEGGXEKXXXXTXXXXXXRKXGGXXGGREXXREGAT 727
G G G GG G GG G GG GG GG A
Sbjct: 127 GGGGCGGGGGGGCGGGSSGGCGGGSSGG---CGGGGGGGCGGGGGGGCGGGSSGGGGYAV 183
Query: 726 XGXGXFXXGGGKXAPGXXXKXXPVXGFXPXXXXLXGXNFFXRLXXGGGG 580
G GGG + G P G G + GGGG
Sbjct: 184 APSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGG 232
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.16
Identities = 24/104 (23%), Positives = 30/104 (28%)
Frame = -2
Query: 891 GAGGMGXXGGXXXGXFXXXGEGGXEKXXXXTXXXXXXRKXGGXXGGREXXREGATXGXGX 712
G GG GG G + G G + GG G G++ G
Sbjct: 229 GGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGYAGGGGGGGGSSGGYAG 288
Query: 711 FXXGGGKXAPGXXXKXXPVXGFXPXXXXLXGXNFFXRLXXGGGG 580
GGG AP P P + + GGGG
Sbjct: 289 SSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSGGGG 332
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
GG GGG G G GG GGG G G GG GG
Sbjct: 137 GGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCG-----GGSSGGGGYAVAPSGGGGC 191
Query: 721 GGXFXXGG 698
GG GG
Sbjct: 192 GGGGSSGG 199
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
GG GGG G G GG GGG G ++ G GG GG
Sbjct: 111 GGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGG 170
Query: 721 GGXFXXGG 698
G GG
Sbjct: 171 CGGGSSGG 178
Score = 29.5 bits (63), Expect = 3.5
Identities = 28/109 (25%), Positives = 30/109 (27%)
Frame = -2
Query: 906 GXGXXGAGGMGXXGGXXXGXFXXXGEGGXEKXXXXTXXXXXXRKXGGXXGGREXXREGAT 727
G G G GG G GG G GG GG GG A
Sbjct: 127 GGGGCGGGGGGGCGGGSSGGCGGGSSGG---CGGGGGGGCGGGGGGGCGGGSSGGGGYAV 183
Query: 726 XGXGXFXXGGGKXAPGXXXKXXPVXGFXPXXXXLXGXNFFXRLXXGGGG 580
G GGG + G P G G + GGGG
Sbjct: 184 APSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGG 232
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 32.7 bits (71), Expect = 0.37
Identities = 23/69 (33%), Positives = 25/69 (36%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
GG GG G RG GG+ GGG G G GG RGG +
Sbjct: 18 GGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYG----------GGGYGGGGRGGGRG 67
Query: 721 GGXFXXGGR 695
G GGR
Sbjct: 68 GSNGSAGGR 76
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 32.3 bits (70), Expect = 0.49
Identities = 27/78 (34%), Positives = 29/78 (37%), Gaps = 8/78 (10%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXR------KXGXANXGVXXX*KXRRXXGGERXXE 740
GG GGG G G GGF GGG R + G G R GG R
Sbjct: 36 GGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFRGGRGGGDRGGFGGRGSPRGGFGG-RGSP 94
Query: 739 RG--GXQXGGXFXXGGRK 692
RG G GG GG +
Sbjct: 95 RGGRGSPRGGRGGAGGMR 112
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/69 (31%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
GG GGG G G G GGG G + G GG +RGG +
Sbjct: 9 GGGGGGFRGGRGGDRGGSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFRG 68
Query: 721 G-GXFXXGG 698
G G GG
Sbjct: 69 GRGGGDRGG 77
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 32.3 bits (70), Expect = 0.49
Identities = 21/69 (30%), Positives = 25/69 (36%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
GG G G RG GGF GG + G GG+R RGG +
Sbjct: 59 GGDRGRSPGGFRGDREGGFSPRGRGGGFRGGDRGGFRGGDRGGSPWRGGDRGNFRGGDRG 118
Query: 721 GGXFXXGGR 695
G + G R
Sbjct: 119 GSPWRGGDR 127
Score = 29.9 bits (64), Expect = 2.6
Identities = 26/71 (36%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Frame = -1
Query: 898 GXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQ-- 725
G GGG G RG GGF GG R G ++ G + R GG R GG
Sbjct: 28 GGGGGFRGGDRGRSPGGFR----GGDR--GRSSSGFRGGDRG-RSPGGFRGDREGGFSPR 80
Query: 724 -XGGXFXXGGR 695
GG F G R
Sbjct: 81 GRGGGFRGGDR 91
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/69 (30%), Positives = 25/69 (36%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
GG GG G GG GG R G G + GG+R RGG +
Sbjct: 43 GGFRGGDRGRSSSGFRGGDRGRSPGGFR--GDREGGFSPRGRGGGFRGGDRGGFRGGDRG 100
Query: 721 GGXFXXGGR 695
G + G R
Sbjct: 101 GSPWRGGDR 109
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 31.5 bits (68), Expect = 0.86
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXG 794
GG GGG G G GG GGG G N G
Sbjct: 798 GGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGG 833
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 31.5 bits (68), Expect = 0.86
Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = -1
Query: 901 GGXGGGXDGXX-RGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQ 725
GG GG G RG GG GG G + G + GG++ RGG Q
Sbjct: 188 GGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWGNQ---GGQQGGGRGGQQ 244
Query: 724 XGGXFXXGGR 695
G + GGR
Sbjct: 245 GPGGWGGGGR 254
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/68 (33%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Frame = -1
Query: 898 GXGGGXDGXXRGXXXGGFXXXXGGG-XRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
G GGG G RG G+ GGG G N G GG RGG
Sbjct: 47 GWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWG-------GNGGGGNGGGGRGGGGG 99
Query: 721 GGXFXXGG 698
GG GG
Sbjct: 100 GGGGRGGG 107
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/70 (35%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXX-GGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQ 725
GG GGG G GG GGG R G G R GG RGG
Sbjct: 66 GGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGG-- 123
Query: 724 XGGXFXXGGR 695
GG GGR
Sbjct: 124 GGGGRGGGGR 133
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 3/72 (4%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGG---FXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGG 731
GG G G D RG GG F GGG R G GG R +RGG
Sbjct: 156 GGRGRGGDRGGRGSDRGGRGGFGRGGGGGFRGGDRGGFG--------GGRGGFRGGDRGG 207
Query: 730 XQXGGXFXXGGR 695
+ G GGR
Sbjct: 208 FRGGRGGDFGGR 219
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 907 RXGGXGGGXDGXXRGXXXGGFXXXXGG 827
R GG GGG G G GGF GG
Sbjct: 17 RGGGGGGGFRGGRGGDRGGGFRGGRGG 43
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/68 (33%), Positives = 23/68 (33%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
GG GGG G G GGF GGG G N G G GG
Sbjct: 55 GGGGGGGGGGGFGGGNGGF-GGGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGG 113
Query: 721 GGXFXXGG 698
GG GG
Sbjct: 114 GGQRQGGG 121
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXG 809
GG GG G RG GGF GGG + G
Sbjct: 529 GGFGGRGGGGFRGGDRGGFRGRGGGGGFRGG 559
Score = 30.3 bits (65), Expect = 2.0
Identities = 28/74 (37%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = -1
Query: 907 RXGGXGG--GXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERG 734
R G GG G G G GGF GGG R G G + R GG R RG
Sbjct: 509 RGGDRGGFRGRSGDRDGGFRGGFGGRGGGGFR--GGDRGGF----RGRGGGGGFRGG-RG 561
Query: 733 GXQXGGXFXXGGRK 692
G + GG GGR+
Sbjct: 562 GDRGGG--FRGGRR 573
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/69 (33%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = -1
Query: 901 GGXGGGXD-GXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQ 725
GG GGG D G G GG GGG G G GG+ GG
Sbjct: 117 GGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYG------GGGGGGGDFGGYGGGGM 170
Query: 724 XGGXFXXGG 698
GG + GG
Sbjct: 171 GGGGYGGGG 179
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/68 (30%), Positives = 24/68 (35%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
GG GG G G GG+ GGG G G+ GG+ GG
Sbjct: 134 GGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGG---GGYGGGGDGGYGGGGFGG 190
Query: 721 GGXFXXGG 698
GG GG
Sbjct: 191 GGMGGYGG 198
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/68 (32%), Positives = 23/68 (33%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
GG GGG G G GG+ GGG G G GG GG
Sbjct: 112 GGYGGGGYGGG-GDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGM 170
Query: 721 GGXFXXGG 698
GG GG
Sbjct: 171 GGGGYGGG 178
Score = 29.5 bits (63), Expect = 3.5
Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Frame = -1
Query: 901 GGXGGGXD-GXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXG--GERXXERGG 731
GG GGG D G G GG GGG G G+ G G GG
Sbjct: 173 GGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGG 232
Query: 730 XQXGGXFXXGG 698
GG + GG
Sbjct: 233 YGPGGGYGMGG 243
Score = 28.3 bits (60), Expect = 8.0
Identities = 24/75 (32%), Positives = 24/75 (32%)
Frame = -2
Query: 906 GXGXXGAGGMGXXGGXXXGXFXXXGEGGXEKXXXXTXXXXXXRKXGGXXGGREXXREGAT 727
G G G GGMG GG G G GG GG GG G
Sbjct: 184 GGGGFGGGGMGGYGGGMGG--GGYGGGGMGGGGYGGGGDGGYGPSGGYGGG-----YGPG 236
Query: 726 XGXGXFXXGGGKXAP 682
G G GGG P
Sbjct: 237 GGYGMGGGGGGGGCP 251
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/70 (31%), Positives = 25/70 (35%)
Frame = -2
Query: 900 GXXGAGGMGXXGGXXXGXFXXXGEGGXEKXXXXTXXXXXXRKXGGXXGGREXXREGATXG 721
G G GG G GG G G GG ++ GG GGR G G
Sbjct: 214 GSGGGGGGGGGGGYGSGGGWGGGGGGRDRDRGG---------WGGGGGGRGYGGGGGGGG 264
Query: 720 XGXFXXGGGK 691
G GGG+
Sbjct: 265 YGYGGGGGGR 274
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1
Query: 898 GXGGGXDGXXRGXXXGGFXXXXGGGXRK 815
G GGG G G GG+ GGG R+
Sbjct: 248 GGGGGGRGYGGGGGGGGYGYGGGGGGRR 275
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/68 (33%), Positives = 23/68 (33%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
GG GGG G GG GGG G G R GG R GG
Sbjct: 96 GGNGGGRGGNGGFDDNGGGRGGNGGGRGGTG----GFGDNGGGRGGNGGGRGGNGGGNNG 151
Query: 721 GGXFXXGG 698
GG GG
Sbjct: 152 GGRGGNGG 159
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/67 (32%), Positives = 24/67 (35%)
Frame = -1
Query: 898 GXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQXG 719
G GGG D G GG+ GGG G A G GG GG G
Sbjct: 320 GGGGGGD-FPAGGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGG----GGGGAAAG 374
Query: 718 GXFXXGG 698
G + GG
Sbjct: 375 GGYNAGG 381
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 906 GXGXXGAGGMGXXGGXXXGXFXXXGEGG 823
G G G GG G GG G + G GG
Sbjct: 115 GCGGGGGGGCGGGGGGGGGGYASGGSGG 142
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 4.6
Identities = 25/108 (23%), Positives = 29/108 (26%), Gaps = 2/108 (1%)
Frame = +2
Query: 581 PPPP*XSLXKKFXPXXXQXXGXNPXTGXILXXXPGAXFPPPXXKXPXPLVAXXXXXXXXX 760
PPPP ++ P P P A +P P P A
Sbjct: 50 PPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPA 109
Query: 761 XXPPXFLXXXXXXVXXXXFSX--PPSPXXXKXPXXXPPXXPIPPAPXS 898
PP + PP P P P P PPAP S
Sbjct: 110 PAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAPHS 157
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 828 PPXXKXXPPXXXPLXXPSXPPPXPP 902
PP PP P P PPP PP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPP 520
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERGGXQX 722
GG GGG G G GG GGG G G GG GG
Sbjct: 120 GGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCG 179
Query: 721 GG 716
GG
Sbjct: 180 GG 181
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 819 LXPPPXXKXXPPXXXPLXXPSXPPPXPP 902
L PPP PP P P PP PP
Sbjct: 242 LPPPPSPVCMPPPPPPCPMPIPCPPPPP 269
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 795 PXXAXPXFLXPPPXXKXXPPXXXPLXXPSXPPPXP 899
P P PPP PP P+ P PPP P
Sbjct: 56 PPPPCPAQFCPPPPI-CPPPPPPPMPCPPPPPPMP 89
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 6.1
Identities = 23/70 (32%), Positives = 24/70 (34%), Gaps = 2/70 (2%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXGVXXX*KXRRXXGGERXXERG--GX 728
GG GGG G G GG GGG G G R GG RG G
Sbjct: 94 GGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWG--GNNGGGGGGRGGGGRGGDGRGPPGS 151
Query: 727 QXGGXFXXGG 698
GG + G
Sbjct: 152 NGGGDWGGNG 161
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGG 824
GG GGG G G GG+ GGG
Sbjct: 103 GGYGGGHGGGHGGAVGGGYGGGGGGG 128
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGG 824
GG GGG G G GG+ GGG
Sbjct: 242 GGPGGGGQGGYGGDYGGGWGQQGGGG 267
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXG 794
GG GGG G + G + GGG G N G
Sbjct: 185 GGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYG 220
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGG 824
GG GGG G G GG+ GGG
Sbjct: 204 GGPGGGGQGGYGGDYGGGWGQQGGGG 229
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGGXRKXGXANXG 794
GG GGG G + G + GGG G N G
Sbjct: 223 GGGGGGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYG 258
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 901 GGXGGGXDGXXRGXXXGGFXXXXGGG 824
GG GGG G G GG+ GGG
Sbjct: 242 GGPGGGGQGGYGGDYGGGWGQQGGGG 267
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,975,624
Number of Sequences: 27780
Number of extensions: 280477
Number of successful extensions: 1964
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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