Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_K18
(1034 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 34 0.19
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 33 0.33
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.77
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.77
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 32 0.77
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 31 1.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.4
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.4
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 29 7.2
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 29 7.2
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 7.2
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 29 7.2
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 29 7.2
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 29 7.2
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 29 7.2
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 7.2
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 28 9.5
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.19
Identities = 25/104 (24%), Positives = 27/104 (25%)
Frame = +3
Query: 708 PAGTXXXGXRXPLAGPRXPXAPXXXXLRRAXXXXXRRSXSPPRXXSPXRXPPXRXTILXA 887
P G P GP P P S +PP P P
Sbjct: 436 PPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG 495
Query: 888 PPXXSPPXEGPXSHAPXXPNGXXTXTRXASPXLXXPTSLXXPPE 1019
PP P P S P P P + PT L P E
Sbjct: 496 PPGPFNPSGAPPSGGPPGPFDPSGAPPSGMPPVPLPTDLPIPSE 539
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 33.1 bits (72), Expect = 0.33
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = +2
Query: 521 TXXXXPLXXGARXAPXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPXIXXP 700
T P A P P P PPP PP P PPP P P P
Sbjct: 32 TPMCQPRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPP----PPPPPMPCPP-PPP 86
Query: 701 PAPRRHXP 724
P PR P
Sbjct: 87 PMPRPSCP 94
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.77
Identities = 26/106 (24%), Positives = 33/106 (31%)
Frame = +2
Query: 563 PXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPXIXXPPAPRRHXPXRXSAA 742
P PG P PPP ++ + PP P P P +P + PP P R P
Sbjct: 279 PTPGMTPRPPPPP---SSGMWPPPPPPPPGRTPGPPG--MPGMPPPPPPSRFGPPGMGG- 332
Query: 743 XRXTEVPXXXGXPXXAXXXXXXXPQVXQPTTXGFPXPXXPXPPXXP 880
P G P+ +P P PP P
Sbjct: 333 ---MPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
Score = 29.9 bits (64), Expect = 3.1
Identities = 24/97 (24%), Positives = 26/97 (26%)
Frame = +2
Query: 581 PXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPXIXXPPAPRRHXPXRXSAAXRXTEV 760
P PPP PP G PPP + PP P R
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Query: 761 PXXXGXPXXAXXXXXXXPQVXQPTTXGFPXPXXPXPP 871
P G P P + P G P P P P
Sbjct: 322 PSRFGPPGMGGMPPPPPPGMRYP--GGMPPPPPPRYP 356
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.77
Identities = 26/106 (24%), Positives = 33/106 (31%)
Frame = +2
Query: 563 PXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPXIXXPPAPRRHXPXRXSAA 742
P PG P PPP ++ + PP P P P +P + PP P R P
Sbjct: 289 PTPGMTPRPPPPP---SSGMWPPPPPPPPGRTPGPPG--MPGMPPPPPPSRFGPPGMGG- 342
Query: 743 XRXTEVPXXXGXPXXAXXXXXXXPQVXQPTTXGFPXPXXPXPPXXP 880
P G P+ +P P PP P
Sbjct: 343 ---MPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
Score = 29.9 bits (64), Expect = 3.1
Identities = 24/97 (24%), Positives = 26/97 (26%)
Frame = +2
Query: 581 PXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPXIXXPPAPRRHXPXRXSAAXRXTEV 760
P PPP PP G PPP + PP P R
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Query: 761 PXXXGXPXXAXXXXXXXPQVXQPTTXGFPXPXXPXPP 871
P G P P + P G P P P P
Sbjct: 332 PSRFGPPGMGGMPPPPPPGMRYP--GGMPPPPPPRYP 366
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 31.9 bits (69), Expect = 0.77
Identities = 17/67 (25%), Positives = 22/67 (32%)
Frame = +3
Query: 825 SPPRXXSPXRXPPXRXTILXAPPXXSPPXEGPXSHAPXXPNGXXTXTRXASPXLXXPTSL 1004
S P SP + P + P P GP AP P+ P P +
Sbjct: 569 SMPSGESPAQPEPSIPAVNPEPSPSQPSSSGPIQTAPPSPSSPNAIPEGPPPGPDVPVMI 628
Query: 1005 XXPPEQS 1025
PP +S
Sbjct: 629 ALPPPKS 635
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/50 (42%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +2
Query: 569 PGX-RPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPXIXXPPAPRR 715
PG RP PPP N PP GP PPP P P PP RR
Sbjct: 32 PGPLRPWGPPPPWHRNRG---PPPFGP----PPPWDRPPPPWRRPPWHRR 74
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 2/58 (3%)
Frame = +2
Query: 536 PLXXGARXAPXPGX--RPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPXIXXPP 703
P G P PG P + PP PP GP PPPT P P PP
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFP-PVGAPPP 459
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = -3
Query: 684 GSGXXVGGGXXYQGPXXGGXXTCAXXAXGGGXAXGRXPGXGAXRAPXXSGXXXXVXGXGL 505
G G GGG P GG + GG A G G G G G G
Sbjct: 213 GGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGY 272
Query: 504 XXG 496
G
Sbjct: 273 AGG 275
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.4
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = -3
Query: 684 GSGXXVGGGXXYQGPXXGGXXTCAXXAXGGGXAXGRXPGXGAXRAPXXSGXXXXVXGXGL 505
G G GGG P GG + GG A G G G G G G
Sbjct: 213 GGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTGGGGGY 272
Query: 504 XXG 496
G
Sbjct: 273 AGG 275
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.4
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = +2
Query: 497 PXXSPXPXTXXXXPLXXGARXAPXPGXRP--XAXPPPXAXNAXVXXPPXXGP**XXPPPT 670
P P P+ G P PG P PPP + P GP PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL-PPISGGPPPPPPPPG 766
Query: 671 XXPLPXIXXPPAPRRHXP 724
P P PP + P
Sbjct: 767 GCPPPPPPPPPGGFKGGP 784
Score = 29.1 bits (62), Expect = 5.4
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = +2
Query: 497 PXXSPXPXTXXXXPLXXGARXAPXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXX 676
P P T P P G P PPP PP G PPP
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP--- 787
Query: 677 PLPXIXXPPAP 709
P P + P AP
Sbjct: 788 PPPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.4
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = +2
Query: 497 PXXSPXPXTXXXXPLXXGARXAPXPGXRP--XAXPPPXAXNAXVXXPPXXGP**XXPPPT 670
P P P+ G P PG P PPP + P GP PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL-PPISGGPPPPPPPPG 766
Query: 671 XXPLPXIXXPPAPRRHXP 724
P P PP + P
Sbjct: 767 GCPPPPPPPPPGGFKGGP 784
Score = 29.1 bits (62), Expect = 5.4
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = +2
Query: 497 PXXSPXPXTXXXXPLXXGARXAPXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXX 676
P P T P P G P PPP PP G PPP
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP--- 787
Query: 677 PLPXIXXPPAP 709
P P + P AP
Sbjct: 788 PPPGMFAPMAP 798
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.4
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Frame = +2
Query: 497 PXXSPXPXTXXXXPLXXGARXAPXPGXRP--XAXPPPXAXNAXVXXPPXXGP**XXPPPT 670
P P P+ G P PG P PPP + P GP PPP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL-PPISGGPPPPPPPPG 349
Query: 671 XXPLPXIXXPPAPRRHXP 724
P P PP + P
Sbjct: 350 GCPPPPPPPPPGGFKGGP 367
Score = 29.1 bits (62), Expect = 5.4
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = +2
Query: 497 PXXSPXPXTXXXXPLXXGARXAPXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXX 676
P P T P P G P PPP PP G PPP
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP--- 370
Query: 677 PLPXIXXPPAP 709
P P + P AP
Sbjct: 371 PPPGMFAPMAP 381
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/74 (28%), Positives = 22/74 (29%)
Frame = +2
Query: 509 PXPXTXXXXPLXXGARXAPXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPX 688
P P T P G P P PPP PP PPP P
Sbjct: 273 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG--GSPPPAGTGSP- 329
Query: 689 IXXPPAPRRHXPXR 730
PP +R P R
Sbjct: 330 -PPPPRQKRQAPER 342
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +3
Query: 819 SXSPPRXXSPXRXPPXRXTILXAPPXXSPPXEGPXSHAPXXPNGXXTXTRXASPXLXXPT 998
S SPP + PP R PP SPP P +P P + P PT
Sbjct: 252 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP-PAGGSPPPPRA-GSPPPPPPPRGSPPT 309
Query: 999 SLXXPPE 1019
PP+
Sbjct: 310 GSLPPPQ 316
Score = 28.3 bits (60), Expect = 9.5
Identities = 24/71 (33%), Positives = 26/71 (36%), Gaps = 12/71 (16%)
Frame = +2
Query: 548 GARXAPXPGXRPXAXPP----PXAXNAXVXXPPXXG----P**XXPPP----TXXPLPXI 691
G R AP G P PP P A + PP G P PPP + P P
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 286
Query: 692 XXPPAPRRHXP 724
PP PR P
Sbjct: 287 GSPPPPRAGSP 297
Score = 28.3 bits (60), Expect = 9.5
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 858 PPXRXTILXAPPXXSPPXEGPXSHAPXXPNGXXTXTRXASPXLXXPTSLXXPP 1016
PP PP SPP G S P G R SP PT PP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-PPPTGSPPPP 283
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/74 (28%), Positives = 22/74 (29%)
Frame = +2
Query: 509 PXPXTXXXXPLXXGARXAPXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPX 688
P P T P G P P PPP PP PPP P
Sbjct: 294 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG--GSPPPAGTGSP- 350
Query: 689 IXXPPAPRRHXPXR 730
PP +R P R
Sbjct: 351 -PPPPRQKRQAPER 363
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +3
Query: 819 SXSPPRXXSPXRXPPXRXTILXAPPXXSPPXEGPXSHAPXXPNGXXTXTRXASPXLXXPT 998
S SPP + PP R PP SPP P +P P + P PT
Sbjct: 273 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP-PAGGSPPPPRA-GSPPPPPPPRGSPPT 330
Query: 999 SLXXPPE 1019
PP+
Sbjct: 331 GSLPPPQ 337
Score = 28.3 bits (60), Expect = 9.5
Identities = 24/71 (33%), Positives = 26/71 (36%), Gaps = 12/71 (16%)
Frame = +2
Query: 548 GARXAPXPGXRPXAXPP----PXAXNAXVXXPPXXG----P**XXPPP----TXXPLPXI 691
G R AP G P PP P A + PP G P PPP + P P
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 307
Query: 692 XXPPAPRRHXP 724
PP PR P
Sbjct: 308 GSPPPPRAGSP 318
Score = 28.3 bits (60), Expect = 9.5
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 858 PPXRXTILXAPPXXSPPXEGPXSHAPXXPNGXXTXTRXASPXLXXPTSLXXPP 1016
PP PP SPP G S P G R SP PT PP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-PPPTGSPPPP 304
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/74 (28%), Positives = 22/74 (29%)
Frame = +2
Query: 509 PXPXTXXXXPLXXGARXAPXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPX 688
P P T P G P P PPP PP PPP P
Sbjct: 279 PPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG--GSPPPAGTGSP- 335
Query: 689 IXXPPAPRRHXPXR 730
PP +R P R
Sbjct: 336 -PPPPRQKRQAPER 348
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/67 (29%), Positives = 24/67 (35%)
Frame = +3
Query: 819 SXSPPRXXSPXRXPPXRXTILXAPPXXSPPXEGPXSHAPXXPNGXXTXTRXASPXLXXPT 998
S SPP + PP R PP SPP P +P P + P PT
Sbjct: 258 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP-PAGGSPPPPRA-GSPPPPPPPRGSPPT 315
Query: 999 SLXXPPE 1019
PP+
Sbjct: 316 GSLPPPQ 322
Score = 28.3 bits (60), Expect = 9.5
Identities = 24/71 (33%), Positives = 26/71 (36%), Gaps = 12/71 (16%)
Frame = +2
Query: 548 GARXAPXPGXRPXAXPP----PXAXNAXVXXPPXXG----P**XXPPP----TXXPLPXI 691
G R AP G P PP P A + PP G P PPP + P P
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 292
Query: 692 XXPPAPRRHXP 724
PP PR P
Sbjct: 293 GSPPPPRAGSP 303
Score = 28.3 bits (60), Expect = 9.5
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 858 PPXRXTILXAPPXXSPPXEGPXSHAPXXPNGXXTXTRXASPXLXXPTSLXXPP 1016
PP PP SPP G S P G R SP PT PP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP-PPPTGSPPPP 289
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +2
Query: 560 APXPGXRPXAXPPPXAXNAXVXXP--PXXGP**XXPPPTXXPLPXIXXPPAP 709
AP P P PP A P P P P P P+ I PPAP
Sbjct: 176 APPPPRPPPQEPPKPVEQAAPPPPPAPMPVPVEKAPEPVPAPVEQIAPPPAP 227
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 4.1
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +2
Query: 509 PXPXTXXXXPLXXGARXAPXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPX 688
P P P G P P PPP PP G PPP L
Sbjct: 68 PVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGA--PPPPPPPSGLGV 125
Query: 689 IXXPPAPR 712
PP P+
Sbjct: 126 APQPPRPK 133
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/54 (29%), Positives = 18/54 (33%)
Frame = +2
Query: 548 GARXAPXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPXIXXPPAP 709
G P P A PP + P P PPP P P + PP P
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +2
Query: 560 APXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPXIXXPP 703
+P P P PPP V PP P PT PLP PP
Sbjct: 1335 SPSPPPPPPPPPPPSDDLTPVPPPPPPPP-TMSKAPTGVPLPVPPPPP 1381
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = +2
Query: 560 APXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPXIXXPPAPR 712
AP P P P P A V P P PPP P P I PP P+
Sbjct: 1071 APSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAPPP--PPRPVI--PPRPK 1117
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = +2
Query: 560 APXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPXIXXPPAPR 712
AP P P P P A V P P PPP P P I PP P+
Sbjct: 1065 APSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAPPP--PPRPVI--PPRPK 1111
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 7.2
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = +2
Query: 536 PLXXGARXAPXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPP--PTXXPLPXIXXPPAP 709
P G R AP P PPP P G PP PT P P P P
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG--MYPPLIPTRVPTPSNGAPEIP 828
Query: 710 RR 715
R
Sbjct: 829 AR 830
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = +2
Query: 560 APXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPXIXXPPAPR 712
AP P P P P A V P P PPP P P I PP P+
Sbjct: 1071 APSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAPPP--PPRPVI--PPRPK 1117
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = +2
Query: 560 APXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPXIXXPPAPR 712
AP P P P P A V P P PPP P P I PP P+
Sbjct: 1065 APSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAPPP--PPRPVI--PPRPK 1111
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = +2
Query: 560 APXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPXIXXPPAPR 712
AP P P P P A V P P PPP P P I PP P+
Sbjct: 1065 APSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAPPP--PPRPVI--PPRPK 1111
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 28.7 bits (61), Expect = 7.2
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = +2
Query: 560 APXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPPPTXXPLPXIXXPPAPR 712
AP P P P P A V P P PPP P P I PP P+
Sbjct: 1071 APSPAPPPSTIPLPPTRGASVGPGPPAVPVRKAPPP--PPRPVI--PPRPK 1117
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 7.2
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = +2
Query: 536 PLXXGARXAPXPGXRPXAXPPPXAXNAXVXXPPXXGP**XXPP--PTXXPLPXIXXPPAP 709
P G R AP P PPP P G PP PT P P P P
Sbjct: 771 PAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG--MYPPLIPTRVPTPSNGAPEIP 828
Query: 710 RR 715
R
Sbjct: 829 AR 830
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical protein
F33E2.6 protein.
Length = 846
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/62 (24%), Positives = 18/62 (29%)
Frame = +3
Query: 828 PPRXXSPXRXPPXRXTILXAPPXXSPPXEGPXSHAPXXPNGXXTXTRXASPXLXXPTSLX 1007
PP+ P PP PP PP P P T +P P +
Sbjct: 367 PPKTDPPRTEPPKTEPPTTEPPKIEPPRTEPPKTEPPPTEPPKTEPPKTTPPKTEPPTTE 426
Query: 1008 XP 1013
P
Sbjct: 427 PP 428
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -3
Query: 684 GSGXXVGGGXXYQGPXXGGXXTCAXXAXGGGXAXGRXPGXG 562
G G GGG Y G GG GGG G G G
Sbjct: 25 GGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGG 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,473,151
Number of Sequences: 27780
Number of extensions: 182710
Number of successful extensions: 970
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2741106356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -