Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_K12
         (868 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical pr...    28   9.9  

>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
           protein F07A11.4 protein.
          Length = 1095

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
 Frame = +2

Query: 341 SRSHITPDNVWAGVLKYGA--PSTPRTKDPYYLECLSELKA 457
           S SH TP N + G+ KY     ST     PYY    S L +
Sbjct: 115 SLSHSTPHNTYRGISKYSTIERSTVADTKPYYSSATSSLSS 155


>Z68113-4|CAA92148.2| 1503|Caenorhabditis elegans Hypothetical protein
            E03G2.2 protein.
          Length = 1503

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 429  IWNASVNSKLRCHVSLXPLKLDEAV 503
            +W A  NS L+ HV L P KL+  V
Sbjct: 1369 LWLALENSNLKAHVELLPHKLESPV 1393


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,874,025
Number of Sequences: 27780
Number of extensions: 306877
Number of successful extensions: 549
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)