Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_K11
         (896 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   3.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   3.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   3.8  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   5.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   8.7  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 778 EPGVPCSRTPSIGSLMISSV*NCCLP 701
           EPG PC  T   G ++ SS+ +  +P
Sbjct: 183 EPGTPCQLTRRQGYVIYSSLGSFFIP 208


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 778 EPGVPCSRTPSIGSLMISSV*NCCLP 701
           EPG PC  T   G ++ SS+ +  +P
Sbjct: 183 EPGTPCQLTRRQGYVIYSSLGSFFIP 208


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 778 EPGVPCSRTPSIGSLMISSV*NCCLP 701
           EPG PC  T   G ++ SS+ +  +P
Sbjct: 183 EPGTPCQLTRRQGYVIYSSLGSFFIP 208


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 790 PRSERLGQEHRGSATSIRPRXQKILDKG 873
           PR ++  Q+H+G  TS   + Q+   +G
Sbjct: 223 PRQQQQAQQHQGVVTSPLSQQQQAAPQG 250


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 410 VPKAMTGMNVPSR 372
           VPK++ G+NV SR
Sbjct: 239 VPKSVAGLNVSSR 251


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,726
Number of Sequences: 438
Number of extensions: 5143
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)