Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_K09
(946 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 26 0.64
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 26 0.64
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 26 0.66
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 32 0.69
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 26 3.4
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.8
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 4.8
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 4.8
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 6.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 6.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 6.4
AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical ... 28 8.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 26.2 bits (55), Expect(2) = 0.64
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -2
Query: 867 PPXXGGGXFXXXXXXXPPPPPPP 799
PP G PPPPPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPP 765
Score = 24.2 bits (50), Expect(2) = 0.64
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 819 PPPPPPPXXXXK 784
PPPPPPP K
Sbjct: 770 PPPPPPPPGGFK 781
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 26.2 bits (55), Expect(2) = 0.64
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -2
Query: 867 PPXXGGGXFXXXXXXXPPPPPPP 799
PP G PPPPPPP
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPP 765
Score = 24.2 bits (50), Expect(2) = 0.64
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 819 PPPPPPPXXXXK 784
PPPPPPP K
Sbjct: 770 PPPPPPPPGGFK 781
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 26.2 bits (55), Expect(2) = 0.66
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -2
Query: 867 PPXXGGGXFXXXXXXXPPPPPPP 799
PP G PPPPPPP
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPP 348
Score = 24.2 bits (50), Expect(2) = 0.66
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 819 PPPPPPPXXXXK 784
PPPPPPP K
Sbjct: 353 PPPPPPPPGGFK 364
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical protein
T16G12.5 protein.
Length = 1142
Score = 31.9 bits (69), Expect = 0.69
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +2
Query: 173 PKEDNSLNTLAESAKKTIEELREKVESALAP----ETVKKNFGTMVDSFNEFYKNLKPAE 340
P ED S N + AKK + +L+ V AP T ++ + VD NE+ + L E
Sbjct: 834 PSEDVSFNLAVDEAKKLLRDLKIDVNQVNAPTLPQRTDRQRYNQQVDVCNEWIEELHDDE 893
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 26.2 bits (55), Expect(2) = 3.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 800 GGGGGGGXXXXXXXKXPPPXXGG 868
G GGGGG PPP GG
Sbjct: 41 GCGGGGGCGGGCAPPPPPPACGG 63
Score = 21.8 bits (44), Expect(2) = 3.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2
Query: 782 FFXXXXGGGGGGG 820
F GGGGGGG
Sbjct: 18 FLFPSGGGGGGGG 30
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 855 GGGXFXXXXXXXPPPPPPP 799
GGG + PPPPPPP
Sbjct: 85 GGGGYGRPQGYVPPPPPPP 103
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 855 GGGXFXXXXXXXPPPPPPP 799
GGG + PPPPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPPPP 309
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 855 GGGXFXXXXXXXPPPPPPP 799
GGG + PPPPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPPPP 309
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 855 GGGXFXXXXXXXPPPPPPP 799
GGG + PPPPPPP
Sbjct: 52 GGGSYAAAPALPPPPPPPP 70
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 855 GGGXFXXXXXXXPPPPPPP 799
GGG + PPPPPPP
Sbjct: 52 GGGSYAAAPALPPPPPPPP 70
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 179 EDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 349
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 179 EDNSLNTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 349
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 867 PPXXGGGXFXXXXXXXPPPPPPP 799
PP GG PPPPPPP
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 867 PPXXGGGXFXXXXXXXPPPPPPP 799
PP GG PPPPPPP
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 867 PPXXGGGXFXXXXXXXPPPPPPP 799
PP GG PPPPPPP
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPP 309
>AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical
protein Y50D4C.3 protein.
Length = 605
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 865 PPRXGGXFXXXXXXXPPPPPP 803
PPR GG F PPPPPP
Sbjct: 478 PPR-GGQFHGGSQQGPPPPPP 497
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,784,603
Number of Sequences: 27780
Number of extensions: 266306
Number of successful extensions: 3934
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2544
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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