Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_K08
(888 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 106 5e-24
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 38 0.001
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 36 0.008
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 36 0.010
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 35 0.018
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 34 0.031
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 33 0.054
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 33 0.054
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 33 0.072
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 32 0.095
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 32 0.13
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 32 0.13
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 31 0.17
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 31 0.17
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 31 0.29
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 30 0.38
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 30 0.51
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 30 0.51
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 29 0.67
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 29 0.67
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 29 0.88
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 29 1.2
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 28 1.5
SPAPB2B4.06 |||conserved fungal protein|Schizosaccharomyces pomb... 28 2.0
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 27 2.7
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 27 2.7
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 27 3.6
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 27 4.7
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 27 4.7
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 27 4.7
SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyc... 26 6.2
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 26 8.2
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 26 8.2
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 26 8.2
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 26 8.2
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 106 bits (254), Expect = 5e-24
Identities = 56/151 (37%), Positives = 82/151 (54%)
Frame = +3
Query: 162 ALEAQLQVRFITKQEQYAVPDSPYAIQCNVHPADLNTLINAILKETSPSFEKAVIFDFLV 341
A Q+QVRF T+ E AV D+P + ++ L+ ++N +LK EK FDFLV
Sbjct: 6 APSGQVQVRFTTRNEDLAVGDTPIFVPTSLKRYGLSQIVNHLLKT-----EKPTPFDFLV 60
Query: 342 CGELLCASLAEHLQEKGVSTEDTLEVEYLGRFPAPTPQDCLMHDDWVSAVQAHSSWILSG 521
G+LL +L E++ + G+STE L++EY+ P HDDW+S +Q S IL+
Sbjct: 61 QGQLLKTTLDEYIVQNGLSTESILDIEYIQSTLPPAYLASFSHDDWISGIQLTSDTILTS 120
Query: 522 SYDNSLHIWSTKGQHKLAIPGHTSPVKAVSW 614
SYD +W G+ K G S +K+ SW
Sbjct: 121 SYDGIARVWDKSGEIKFQSTGCGSSLKSASW 151
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 38.3 bits (85), Expect = 0.001
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +3
Query: 468 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQG 629
H D V + S+ ++SGS D ++ +W G ++ + GHT PV +V + +G
Sbjct: 352 HTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDRG 405
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 468 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLA-IPGHTSPVKAVSW 614
H D V +Q + + SGSYD ++ +W+ ++A + GH+S V + +
Sbjct: 272 HSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF 321
Score = 30.7 bits (66), Expect = 0.29
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +3
Query: 351 LLCASLAEHLQEKGVSTEDTLEVEYLGRFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYD 530
++C L ++ G S + T+ + L F + H V+ +Q ++SGS D
Sbjct: 276 VMCLQLVRNILASG-SYDATIRLWNLATFQQVALLEG--HSSGVTCLQFDQCKLISGSMD 332
Query: 531 NSLHIWSTKGQHKLAI-PGHTSPVKAVSWVS 620
++ IW+ + ++I GHT V +++ S
Sbjct: 333 KTIRIWNYRTSECISILHGHTDSVLCLTFDS 363
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 468 HDDWVSAVQAH--SSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVS 611
H D++ +V WI+SGS D ++ WS H +L + GH + V +V+
Sbjct: 511 HKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVA 561
Score = 29.1 bits (62), Expect = 0.88
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 453 QDCLMH-DDWVSAVQ--AHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSW 614
Q ++H DD V+ V +I +GS D + IW++ G + GH V +V++
Sbjct: 410 QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAF 466
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 35.5 bits (78), Expect = 0.010
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 510 ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSW 614
+ SGS DN++ IW+ K + L + GHT+P+ V W
Sbjct: 242 LASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRW 277
Score = 32.3 bits (70), Expect = 0.095
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 501 SSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSW 614
S ++S S D +L +W + + K +PGH V AV W
Sbjct: 443 SRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDW 481
Score = 31.1 bits (67), Expect = 0.22
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 504 SWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVS 611
+WI S SYD ++ IW K G+ + GH + V +S
Sbjct: 281 NWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLS 317
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 34.7 bits (76), Expect = 0.018
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 468 HDDWVS--AVQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAV 608
H D+V AV S W LSGS D S+ W + GQ L GH + V +V
Sbjct: 537 HTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISV 586
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +3
Query: 486 AVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSW 614
A+ + +I GS D + +WS G + GH V ++++
Sbjct: 450 AISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAF 492
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 33.9 bits (74), Expect = 0.031
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 483 SAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAV 608
SA +S I++GS+D++ +W+ GQ K + GH S V AV
Sbjct: 103 SASALNSETIITGSWDSTARVWAL-GQCKYVLKGHQSSVWAV 143
Score = 30.3 bits (65), Expect = 0.38
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 462 LMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQ 626
L H+D V ++ S S D + +W++ G+ + GHTS V +++++ Q
Sbjct: 173 LAHNDCVRSLCQIPGGFASCSNDGVIKLWTSDGEFLYELHGHTSFVYSLTYIHNQ 227
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 33.1 bits (72), Expect = 0.054
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 468 HDDWVSAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAV 608
H D V + + ++SGSYD+S+ IW + G+ + GH+ + +V
Sbjct: 506 HTDSVRTISGYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSV 553
Score = 30.7 bits (66), Expect = 0.29
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 468 HDDWVSAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAV 608
H + V AV+ H + ++SGS D ++ +W+ K + GH S ++ +
Sbjct: 390 HKEGVWAVKIHENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCL 437
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/47 (23%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 468 HDDWVSAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKA 605
HD +V+ + + ++SGS D+++ IW G+ + +P ++ + +
Sbjct: 588 HDAFVTLLNVFQNRLISGSADSTIRIWDLNTGKPLMVLPSNSGYISS 634
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 33.1 bits (72), Expect = 0.054
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 498 HSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSW 614
+S ++ +GS D ++++WS G + +PGH V V +
Sbjct: 280 NSRFVGAGSSDKNVYVWSATGDLRYVLPGHEGSVNHVDF 318
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 32.7 bits (71), Expect = 0.072
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = +3
Query: 459 CLM-HDDWVSAVQAH--SSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVS 611
CL H ++VS++ + + ++SGS+D ++ IW+ + G +P H+ P+ +VS
Sbjct: 133 CLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVS 187
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 486 AVQAHSSWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVS 620
+V + WI + S D ++ IWS + + + GH + V W +
Sbjct: 61 SVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWAT 106
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 32.3 bits (70), Expect = 0.095
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 468 HDDWVSAVQAHSSWILSGSYDNSLHIWSTK 557
H +S++Q S+ + SGSYDNS+ IW +
Sbjct: 535 HTAPISSLQFDSNHLYSGSYDNSVRIWDLR 564
Score = 30.7 bits (66), Expect = 0.29
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +3
Query: 363 SLAEHLQEKGVSTEDTLEVEYLGRFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYDNSLH 542
+LA +K V D V YLG H D+VS + S+I +GS D ++
Sbjct: 346 TLATASTDKTVKVWDMAGVVYLGSLKG--------HSDYVSCLAIQDSFIATGSMDTTVR 397
Query: 543 IWS 551
+W+
Sbjct: 398 LWN 400
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +3
Query: 432 RFPAPTPQDCLMHDDWVSAVQAHSSW--ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVK 602
R P + +H+ + +Q S + SG DN+L +W + L HT+ VK
Sbjct: 236 RAPGCCAEMMKVHEQEICGLQWDRSLGQLASGGNDNNLFVWDYRSSRPLHKFEEHTAAVK 295
Query: 603 AVSWVSFQ 626
A+ W Q
Sbjct: 296 AIGWSPHQ 303
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 468 HDDWVS--AVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVS 611
H +VS A+ S + LS S+D ++ +W KG+ GHTS V +VS
Sbjct: 62 HSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVS 112
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Frame = +3
Query: 444 PTPQDCLM---HDDWVSAVQAHSS---WILSGSYDNSLHIWSTK 557
P +DCL H D+V+++ H + LSGS D L +WS K
Sbjct: 337 PVRKDCLCCFEHSDFVTSIAFHPKDDRFFLSGSLDCKLRLWSIK 380
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +3
Query: 468 HDDWVSAVQAH--SSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVS 611
H WV V + W +G+ D ++ IW G KL + GH + V+ ++
Sbjct: 162 HLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLA 212
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 486 AVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVS 611
AVQ +++GS D+++ +W G+ + H V+A+S
Sbjct: 296 AVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALS 338
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 30.7 bits (66), Expect = 0.29
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 510 ILSGSYDNSLHIWSTKGQ-HKLAIPGHTSPVKAVSWVSFQ 626
+ SG DN + IW + K H + VKAV+W +Q
Sbjct: 319 LASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQ 358
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 30.3 bits (65), Expect = 0.38
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 504 SWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQ 626
S++LSGS D ++ +W+ K + + IP S V+A+ WV+ Q
Sbjct: 202 SFLLSGSRDKTVQVWNIKKRSAVRTIPVFHS-VEAIGWVNGQ 242
Score = 29.1 bits (62), Expect = 0.88
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 477 WVSAVQAHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVS 620
W + S + SGS D ++ IW+ Q + + GHT + + ++S
Sbjct: 511 WACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYIS 559
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Frame = +3
Query: 507 WILSGSYDNSLHIWSTKGQHKL-----AIPGHTSPVKAVS 611
W+ +G+ DN++ +W+ + + GHT+ V AV+
Sbjct: 378 WLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVA 417
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 29.9 bits (64), Expect = 0.51
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 468 HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAI-PGHTSPVKAVSW 614
H D+V H WILS S D ++ IW+ + ++ +AI GH+ V ++
Sbjct: 94 HMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAF 145
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 29.9 bits (64), Expect = 0.51
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 468 HDDWVSAVQAHSSWILSGSYDNSLHIW--STKGQH 566
H+D + V+ + I+SG YD ++ IW +T QH
Sbjct: 428 HEDLIRTVRFNDEKIVSGGYDGTVRIWNFNTGEQH 462
Score = 27.1 bits (57), Expect = 3.6
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 432 RFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPV 599
RFPA QD D V VQ ++SGS D ++ +W + L + GH+ V
Sbjct: 210 RFPAD--QDFRATLDSVYCVQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSV 264
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 646 VSGSHDQTAILWVWE 690
VSGS D T I+W W+
Sbjct: 277 VSGSSDSTIIIWDWQ 291
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 29.5 bits (63), Expect = 0.67
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
Frame = +3
Query: 456 DCLM----HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQH---KLAIPGHTSPVKAV 608
DCL H V V H + ++SGSYDNS+ W G + GHT+ V A+
Sbjct: 414 DCLAVLQEHTQDVKVVTWHPTEDLLVSGSYDNSICFWRDDGDDWALTCQLQGHTNTVWAL 473
Query: 609 SW 614
++
Sbjct: 474 AF 475
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 29.5 bits (63), Expect = 0.67
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 501 SSWILSGSYDNSLHIWSTKGQHK--LAIPGHTSPVKAVSWVS 620
+SW + S+DNS+ +W G++K + + S + + W+S
Sbjct: 354 ASWNIYNSFDNSMVLWCPYGKNKTLICLLNFQSSLLSFEWIS 395
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 29.1 bits (62), Expect = 0.88
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 510 ILSGSYDNSLHIWSTKGQHKL--AIPGHTSPVKAVSW 614
+LSGS DN + IW L GH P++ +S+
Sbjct: 282 LLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSF 318
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 468 HDDWVSAVQAHSSWILSGSYDNSLHIW-STKGQHKLAIPGHTSPVKAVS 611
H D V V I+S SYD +L +W ++ G + GH V +V+
Sbjct: 576 HTDSVREVACLGDLIVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVT 624
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 504 SWILSGSYDNSLHIWSTKGQHKLA-IPGHTSPVKAVSWVSF 623
+++LSGS D+ + IW + LA + GH VK V++V++
Sbjct: 441 TFVLSGSEDDKIRIWHRESGKLLATLSGH---VKCVNYVAY 478
>SPAPB2B4.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 245
Score = 27.9 bits (59), Expect = 2.0
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = -3
Query: 691 IPIPRVLLFDHEIH*QM*LDHPWKDTHDTAFTGDV*PGMASLCCPFVLHICKLLS*LPDR 512
I +P V+ +D + H KD T + PG+ + C VL IC LS LP++
Sbjct: 120 ITVPPVIFYDKSTRQVYAIAHVGKDVGLDDDT--IHPGLIATCMDEVLAICSFLS-LPNK 176
Query: 511 I 509
I
Sbjct: 177 I 177
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/31 (32%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 468 HDDWV-SAVQAHSSWILSGSYDNSLHIWSTK 557
H+D+V +A ++ ++SG YD ++ +W T+
Sbjct: 165 HEDYVRTASWMSATRLVSGGYDGTIRLWDTR 195
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 513 LSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQG*SSYI 644
+SGSYD ++ I++ + H + HT ++ V+ V F + YI
Sbjct: 289 VSGSYDKTIRIYNVREGHSRDV-YHTKRMQRVTAVKFSMDAQYI 331
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = +3
Query: 480 VSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAIPG---HTSPVKAVS 611
V ++ AHS W+LSG + + ++ST+ Q + HT+PV ++
Sbjct: 191 VYSLAAHSRGLWVLSGVNNGDIILYSTRHQEGYPVTSLKKHTAPVSCLA 239
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 26.6 bits (56), Expect = 4.7
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +3
Query: 477 WVSAVQAHSSWILSGSYDNSLHIWSTK 557
W + S+ ++SG+ DN++ +W K
Sbjct: 56 WTCDINKSSTLMVSGAADNTMRLWDVK 82
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 26.6 bits (56), Expect = 4.7
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Frame = +3
Query: 411 LEVEYLGRFPAPTPQD--CLMHDDWVSAVQAHSSW---ILSGSYDNS-LHIWSTKGQHKL 572
LE + +GR TP D + D++ + H S +L +Y S LHIWS +G+ +L
Sbjct: 289 LENQIVGRAHGKTPHDQSIRLEDEFRFMLVRHWSLYDSMLHSAYVGSRLHIWSEEGRKRL 348
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 507 WILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSW 614
+I+SG L + ST+ G+ + GHTSPV++V++
Sbjct: 159 FIVSGHQTGQLFLISTETGRLFHVLSGHTSPVRSVAF 195
>SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 503
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 360 ASLAEHLQEKGVSTEDTLEVEYLGRF 437
AS+ + E+ +S ED L +E+LG+F
Sbjct: 411 ASMKSVVGEEALSQEDRLALEFLGKF 436
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 25.8 bits (54), Expect = 8.2
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 468 HDDWVSAVQAHSSWILSGSYDNSLHIW 548
H V A+ ++++SGS+D+S+ +W
Sbjct: 659 HHSEVWALAVGPTFVVSGSHDHSIRLW 685
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 25.8 bits (54), Expect = 8.2
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +3
Query: 459 CLMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHK---LAIPGHTSPVKAVSWVSF 623
C+ DW A ++LSGS D L +W ++K L GH + + +V +
Sbjct: 47 CVNTLDW----SADGEFLLSGSDDTRLIVWDVFNEYKPRHLISTGHVQNIFSAKFVPY 100
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 332 FLSMWRVTLCLPRRALTRKRGID 400
F+ + T+C P R LT RG+D
Sbjct: 450 FIQVANETMCRPIRKLTESRGLD 472
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.8 bits (54), Expect = 8.2
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
Frame = +3
Query: 408 TLEVEYLGRFPAPTPQDCL----MHDDWVSAVQ----AHSSWILSGSYDNSLHIWS 551
T + R P C+ +H ++V V SWI S +D SL+IW+
Sbjct: 251 TASYDMTSRIFDPEQHSCIRKVDLHSEFVRDVDWSDFGDGSWIASVGWDESLYIWN 306
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,300,392
Number of Sequences: 5004
Number of extensions: 67545
Number of successful extensions: 285
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 282
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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