Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_K03
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 32 0.47
AC006835-1|AAF40015.2| 903|Caenorhabditis elegans Hypothetical ... 32 0.62
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.83
U13019-8|AAC24446.2| 238|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF024503-15|AAG24087.2| 289|Caenorhabditis elegans Serpentine r... 31 1.1
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z99277-3|CAB16486.1| 338|Caenorhabditis elegans Hypothetical pr... 29 4.4
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 29 4.4
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 29 4.4
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 29 4.4
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 29 4.4
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 28 7.7
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 32.3 bits (70), Expect = 0.47
Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Frame = +2
Query: 167 ARNLFAESKQRL--AERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEHQIETSE 340
A L E ++ + E+ + +N IS +ARQ + EL K+A ++ E SE
Sbjct: 2541 AAQLLTEMRRTIENCEKRCLILNQISDIARQNEASRNEMELWLKSASDVIGERRVEELSE 2600
Query: 341 ENLK-KMQLIAVHIGYQFENIHKSAKMLTEINEQITAMQR*EIIGKLFLFVTTQTNGKRF 517
E ++ ++Q++ + E K A++ ++ N+ + + E L + +F
Sbjct: 2601 EVVRQELQVLERVVEQLTERKDKMAEINSQANKIVDTYTKDEAHNLSHLLSRLNMSWTKF 2660
Query: 518 N-QLKAFFIVVVTKLLCVRDF 577
N ++ V+ L RDF
Sbjct: 2661 NDNIRIRRAVLEASLRSXRDF 2681
>AC006835-1|AAF40015.2| 903|Caenorhabditis elegans Hypothetical
protein ZK993.2 protein.
Length = 903
Score = 31.9 bits (69), Expect = 0.62
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Frame = +2
Query: 161 SSARNLFAESKQRLAERVQVNM--NNISSLARQIQRGSKSNELLTKAAREMASTEHQI-- 328
S R L AE + +Q+++ N L ++Q+ S + E +++I
Sbjct: 700 SRVRKLKAEELKIHQNHLQMHIQENTYPELNEKLQKIDNSFSEILGQQEEYGEFDYEIAE 759
Query: 329 --ETSEENLKKMQLIAVHIGYQFENIHKSAKMLTEINEQITAM 451
E E K+ QL+ + + FE +K +L E+ TAM
Sbjct: 760 KMENFESEFKEKQLVVLEVDDDFEKFYKHQALLEELQSLKTAM 802
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.83
Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Frame = +2
Query: 167 ARNLFAESKQRL--AERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEHQIETSE 340
A L E ++ + E+ + +N IS +ARQ + EL K+A ++ E SE
Sbjct: 2541 AAQLLTEMRRTIENCEKRCLILNQISDIARQNEASRNEMELWLKSASDVIGERRVEELSE 2600
Query: 341 ENLK-KMQLIAVHIGYQFENIHKSAKMLTEINEQITAMQR*EIIGKLFLFVTTQTNGKRF 517
E ++ ++Q++ + E K A++ ++ N+ + + E L + +F
Sbjct: 2601 EVVRQELQVLERVVEQLTERKDKMAEINSQANKIVDTYTKDEAHNLSHLLSRLNMSWTKF 2660
Query: 518 N-QLKAFFIVVVTKLLCVRDF 577
N ++ V+ L RDF
Sbjct: 2661 NDNIRIRRAVLEASLRSRRDF 2681
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.5 bits (68), Expect = 0.83
Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Frame = +2
Query: 167 ARNLFAESKQRL--AERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEHQIETSE 340
A L E ++ + E+ + +N IS +ARQ + EL K+A ++ E SE
Sbjct: 2541 AAQLLTEMRRTIENCEKRCLILNQISDIARQNEASRNEMELWLKSASDVIGERRVEELSE 2600
Query: 341 ENLK-KMQLIAVHIGYQFENIHKSAKMLTEINEQITAMQR*EIIGKLFLFVTTQTNGKRF 517
E ++ ++Q++ + E K A++ ++ N+ + + E L + +F
Sbjct: 2601 EVVRQELQVLERVVEQLTERKDKMAEINSQANKIVDTYTKDEAHNLSHLLSRLNMSWTKF 2660
Query: 518 N-QLKAFFIVVVTKLLCVRDF 577
N ++ V+ L RDF
Sbjct: 2661 NDNIRIRRAVLEASLRSRRDF 2681
>U13019-8|AAC24446.2| 238|Caenorhabditis elegans Hypothetical
protein T12A2.7 protein.
Length = 238
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +2
Query: 170 RNLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEHQIETSEENL 349
RN A+++ L ++ + + + + +QR +LLT A +E+ T+ + N
Sbjct: 118 RNAKAQNEHLLMRQINLELMDEYAAESYLQRNKVMEDLLTHAEKELRKTKEAVMEVHANR 177
Query: 350 KKMQLIA 370
K QL A
Sbjct: 178 KMAQLKA 184
>AF024503-15|AAG24087.2| 289|Caenorhabditis elegans Serpentine
receptor, class x protein22 protein.
Length = 289
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 564 VYEISNCIRFQKRT*IVDII*LFAVGF*ILFSATELFF---LMDNILCNLGFEIEYLFMT 734
VYEISN + I+ + LFAV + + F LM NI C +GF I +LF
Sbjct: 86 VYEISNQLHL-----IIALNRLFAVFWTFHYDQIFTKFNTNLMKNIACFIGFSICFLFYD 140
Query: 735 VLYKYF 752
VL YF
Sbjct: 141 VLGCYF 146
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Frame = +2
Query: 143 MTSASSSSARNLFAESKQR--LAERVQVNMNNISSLARQIQ-RGSKSNELLTKAAREMAS 313
M S RNL + ++ + + ++ ++ N A+ Q R + + +L + +E A
Sbjct: 228 MVDELESENRNLTEKGRELKLIIDSLKSDVTNKRDTAKSSQQREQELSNILEEKEKESAQ 287
Query: 314 TEHQIETSEENLKKMQLIAVHIGYQFENIHKSAKMLTEINEQIT 445
Q+E S L+ Q H + I + K ++E+NE++T
Sbjct: 288 LLQQLEESRAALRDEQRHLEHQEAENGKIVEQLKTVSELNEKLT 331
>Z99277-3|CAB16486.1| 338|Caenorhabditis elegans Hypothetical
protein Y53C12A.4 protein.
Length = 338
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Frame = +2
Query: 299 REMASTEHQIETSEENLKK-MQLIA-VHIGYQFENIHKSAKMLTEINE-----QITAMQR 457
R ST ++ TS ENLK M+L+ Q+E H + N+ I R
Sbjct: 243 RHNFSTMNKYITSPENLKTVMELLRDKRRNIQYEAFHVFKIFVANPNKPRPITDILTRNR 302
Query: 458 *EIIGKLFLFVTTQTNGKRFNQLKAFFIVVVTKL 559
+++ L F +TN ++FN KA+ I + +L
Sbjct: 303 DKLVEFLTAFHNDRTNDEQFNDEKAYLIKQIQEL 336
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
protein R07G3.3c protein.
Length = 1316
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Frame = +2
Query: 161 SSARNLFAESKQRLAERVQVNMNNISSLARQIQRG--SKSNELLTKAAREMASTEHQIET 334
++ R+L AESK L + V N +SSL ++ +NE L + +++ Q+E
Sbjct: 165 ATERSLHAESKTWLMQEVSERDNKVSSLRLELSNKDIQGANERL-QYVQQINLLNSQVEN 223
Query: 335 SEENLKKMQLIAVHIGYQFENIHKS-AKMLTEINEQI---TAMQR 457
E L ++ + + EN S + + E+I T +QR
Sbjct: 224 LNEKLDMLKFTNADLIKRMENTELSKVSEIANLEEEIRCQTELQR 268
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
protein R07G3.3a protein.
Length = 1982
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Frame = +2
Query: 161 SSARNLFAESKQRLAERVQVNMNNISSLARQIQRG--SKSNELLTKAAREMASTEHQIET 334
++ R+L AESK L + V N +SSL ++ +NE L + +++ Q+E
Sbjct: 165 ATERSLHAESKTWLMQEVSERDNKVSSLRLELSNKDIQGANERL-QYVQQINLLNSQVEN 223
Query: 335 SEENLKKMQLIAVHIGYQFENIHKS-AKMLTEINEQI---TAMQR 457
E L ++ + + EN S + + E+I T +QR
Sbjct: 224 LNEKLDMLKFTNADLIKRMENTELSKVSEIANLEEEIRCQTELQR 268
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
protein R07G3.3b protein.
Length = 1987
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Frame = +2
Query: 161 SSARNLFAESKQRLAERVQVNMNNISSLARQIQRG--SKSNELLTKAAREMASTEHQIET 334
++ R+L AESK L + V N +SSL ++ +NE L + +++ Q+E
Sbjct: 165 ATERSLHAESKTWLMQEVSERDNKVSSLRLELSNKDIQGANERL-QYVQQINLLNSQVEN 223
Query: 335 SEENLKKMQLIAVHIGYQFENIHKS-AKMLTEINEQI---TAMQR 457
E L ++ + + EN S + + E+I T +QR
Sbjct: 224 LNEKLDMLKFTNADLIKRMENTELSKVSEIANLEEEIRCQTELQR 268
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/59 (30%), Positives = 35/59 (59%)
Frame = +2
Query: 191 KQRLAERVQVNMNNISSLARQIQRGSKSNELLTKAAREMASTEHQIETSEENLKKMQLI 367
+Q+L ++V N + S LARQIQ G + L +E+ + ++ +EE+ K+++L+
Sbjct: 229 RQQLLQKVAQNQAHESELARQIQ-GIEGK--LRVKEQELVAAGKAVKNNEEHEKELKLL 284
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/108 (16%), Positives = 48/108 (44%)
Frame = +2
Query: 134 RIKMTSASSSSARNLFAESKQRLAERVQVNMNNISSLARQIQRGSKSNELLTKAAREMAS 313
+++ S +S+ ++ + R E + + L+ + Q+ K+N+ K +
Sbjct: 894 QLQQESENSAELDDIRGRLQTRNQELEYIVNDMRDRLSEEEQQNEKNNDERRKQMETVRD 953
Query: 314 TEHQIETSEENLKKMQLIAVHIGYQFENIHKSAKMLTEINEQITAMQR 457
E Q+E E+ +K+ L ++ + N+ + L + +++ +R
Sbjct: 954 LEEQLEQEEQARQKLLLDKTNVDQRLRNLEERLVELQDAYDKLLKEKR 1001
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,668,964
Number of Sequences: 27780
Number of extensions: 320367
Number of successful extensions: 903
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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