Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_J24
(904 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1568 + 27922338-27922342,27922839-27923058,27923369-279235... 124 1e-28
08_02_1573 + 27956351-27956409,27956411-27956630,27957000-279571... 123 2e-28
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265... 120 2e-27
02_02_0678 + 12868735-12868739,12869576-12869795,12870280-128704... 119 3e-27
05_07_0079 - 27539389-27539892,27540059-27540343,27540453-275405... 45 7e-05
04_04_0401 - 24946801-24947562 44 2e-04
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 36 0.058
05_03_0678 - 16871481-16871620,16871836-16871881,16872170-168722... 33 0.24
02_05_1241 - 35189111-35189389,35189604-35189711,35189982-351907... 30 2.9
09_02_0251 - 6282420-6282526,6282642-6283104,6283223-6283289,628... 29 5.1
09_06_0364 + 22554082-22554225,22554306-22554520,22554671-225547... 29 6.7
03_02_0829 - 11599665-11600364,11600853-11601076,11601786-116020... 29 6.7
06_03_0049 + 15961706-15962017,15962952-15963851,15964769-159649... 28 8.8
>08_02_1568 +
27922338-27922342,27922839-27923058,27923369-27923519,
27923874-27924079,27924211-27924264
Length = 211
Score = 124 bits (299), Expect = 1e-28
Identities = 56/99 (56%), Positives = 77/99 (77%)
Frame = +3
Query: 459 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 638
+ P LLGPG KFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG++ M +
Sbjct: 118 QIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQ 172
Query: 639 LAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 755
+ QN+ +S+NFLVSLLKK+WQNVR L++KSTMG P R++
Sbjct: 173 IQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPYRVF 211
Score = 116 bits (280), Expect = 2e-26
Identities = 57/118 (48%), Positives = 73/118 (61%)
Frame = +2
Query: 125 DTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCV 304
+ L E ++ V+ K+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPKM+VC+
Sbjct: 7 EALKEAISQVVADCKEKNRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCM 66
Query: 305 LGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRFVG 478
LGD QH +EA+ + + M SE++IKQIPR +G
Sbjct: 67 LGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLG 124
>08_02_1573 +
27956351-27956409,27956411-27956630,27957000-27957150,
27957602-27957807,27957967-27958020
Length = 229
Score = 123 bits (297), Expect = 2e-28
Identities = 56/99 (56%), Positives = 77/99 (77%)
Frame = +3
Query: 459 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 638
+ P LLGPG KFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG++ M +
Sbjct: 136 QIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQ 190
Query: 639 LAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 755
+ QN+ +S+NFLVSLLKK+WQNVR L++KSTMG P R++
Sbjct: 191 IQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIRVF 229
Score = 118 bits (284), Expect = 6e-27
Identities = 59/122 (48%), Positives = 75/122 (61%)
Frame = +2
Query: 113 KCLGDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 292
K + L E ++ V+ SK+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPKM
Sbjct: 21 KLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 80
Query: 293 QVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRF 472
+VC+LGD QH +EA+ + + M SE++IKQIPR
Sbjct: 81 KVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 140
Query: 473 VG 478
+G
Sbjct: 141 LG 142
>01_06_1419 +
37225007-37225011,37225633-37225852,37226347-37226516,
37226615-37226676,37227002-37227207,37227581-37227634
Length = 238
Score = 120 bits (288), Expect = 2e-27
Identities = 57/122 (46%), Positives = 76/122 (62%)
Frame = +2
Query: 113 KCLGDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 292
K D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPKM
Sbjct: 3 KLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 62
Query: 293 QVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRF 472
+VC+LGD QH +EA+ + + M SE++IKQIPR
Sbjct: 63 KVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 122
Query: 473 VG 478
+G
Sbjct: 123 LG 124
Score = 118 bits (284), Expect = 6e-27
Identities = 52/90 (57%), Positives = 72/90 (80%)
Frame = +3
Query: 486 LNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSI 665
++K GKFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG+ M ++ QNV +S+
Sbjct: 149 VSKRGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNCAMEEKQIFQNVQMSV 208
Query: 666 NFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 755
NFLVSLLKK+WQNVR L++KSTMG R++
Sbjct: 209 NFLVSLLKKNWQNVRCLYLKSTMGKVIRVF 238
>02_02_0678 +
12868735-12868739,12869576-12869795,12870280-12870430,
12870853-12871058,12871166-12871219
Length = 211
Score = 119 bits (287), Expect = 3e-27
Identities = 56/99 (56%), Positives = 75/99 (75%)
Frame = +3
Query: 459 RFPVLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDE 638
+ P LLGPG KFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG+ M +
Sbjct: 118 QIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNCAMEEKQ 172
Query: 639 LAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 755
+ QNV +S+NFLVSLLKK+WQNVR L++KSTMG R++
Sbjct: 173 IFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKVYRVF 211
Score = 118 bits (285), Expect = 5e-27
Identities = 56/122 (45%), Positives = 76/122 (62%)
Frame = +2
Query: 113 KCLGDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 292
K D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK+
Sbjct: 3 KLQSDALREAISQIANDSREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKL 62
Query: 293 QVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRF 472
+VC+LGD QH +EA+ + + M SE++IKQIPR
Sbjct: 63 KVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 122
Query: 473 VG 478
+G
Sbjct: 123 LG 124
>05_07_0079 -
27539389-27539892,27540059-27540343,27540453-27540550,
27540951-27541042,27541155-27541259,27541360-27541567,
27542469-27542472,27542742-27542765,27545025-27546266
Length = 853
Score = 45.2 bits (102), Expect = 7e-05
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +3
Query: 465 PVLLGPGLNKAGKFPGLLSHQES-MTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDEL 641
P +LG K P + + +++ +V + ++ C + VG +DM ++
Sbjct: 151 PRVLGKAFYSTKKAPVAVDFARTGWLEQVRKVMNSTFLYLRTGTCSGIKVGRLDMKEEDT 210
Query: 642 AQNVHLSINFLVSLLKKHWQNVRSLHMKS 728
+NV ++ V + K W NVRSLH+K+
Sbjct: 211 VENVMAAVEAAVENVPKKWANVRSLHLKA 239
>04_04_0401 - 24946801-24947562
Length = 253
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/93 (23%), Positives = 44/93 (47%)
Frame = +3
Query: 477 GPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVH 656
G KA + + ++ + E ++ +++ C +V VGH M +E +NV
Sbjct: 113 GKAAAKAARVVPVDLADQAWAESAREAARRVELRVEGGTCRAVRVGHAAMAREEAVENVV 172
Query: 657 LSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 755
++ + + + W+NVR+LH+K+ LY
Sbjct: 173 AAVEAAAACVPRKWRNVRALHVKAPESVALPLY 205
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 35.5 bits (78), Expect = 0.058
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 161 SSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAK 337
S+ +KKRNF ETVE + L DP++ D+ G + L + ++V V + DEA+
Sbjct: 279 SANEKKRNFTETVEAHVML-GVDPRRGDQMVRGALTLPHGTGKTVRVAVFAEGPAADEAR 337
>05_03_0678 -
16871481-16871620,16871836-16871881,16872170-16872243,
16872495-16872552,16872640-16872702,16872891-16873012,
16873132-16873247,16873367-16873428,16873497-16873589,
16874061-16874138,16874248-16874423,16874500-16874550,
16874964-16875078
Length = 397
Score = 33.5 bits (73), Expect = 0.24
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +2
Query: 128 TLYECVNAVLQSSKDKK-RNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM-QVC 301
T +E + + LQS K K R +E + D + K + +K + PK +VC
Sbjct: 256 TRWEQLKSTLQSGKHKGLRRCIEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRVC 315
Query: 302 VLGDQQHCDEAKTLNVPCM 358
V D +CD+ VP +
Sbjct: 316 VPIDPNNCDDFDPTTVPTL 334
>02_05_1241 -
35189111-35189389,35189604-35189711,35189982-35190713,
35190811-35191230,35191484-35191565,35191719-35192002,
35193104-35193256
Length = 685
Score = 29.9 bits (64), Expect = 2.9
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +3
Query: 639 LAQNVHLSINFLVSLLKKH 695
+ + VHLS+NF++ L+KKH
Sbjct: 302 IVEGVHLSLNFVMGLMKKH 320
>09_02_0251 -
6282420-6282526,6282642-6283104,6283223-6283289,
6283536-6283808,6284096-6284907,6285402-6285479,
6285586-6285636,6285737-6285817,6285903-6285982,
6288481-6288652
Length = 727
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -2
Query: 588 PSSFGT*WFP*LHQSSASWTPGGREDQGIYQLCSNRDPTK 469
P F WFP +H ++ S R Q I+ +C N+ P K
Sbjct: 493 PVYFKNDWFPFIHSTTLSEGTNARRRQDIFGVCCNK-PNK 531
>09_06_0364 +
22554082-22554225,22554306-22554520,22554671-22554752,
22554976-22555371,22555553-22556293,22556420-22556551,
22556981-22557367
Length = 698
Score = 28.7 bits (61), Expect = 6.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 621 DMTPDELAQNVHLSINFLVSLLKKH 695
D + + VHLS+NF++ L++KH
Sbjct: 262 DRKESVVVEGVHLSLNFVMGLMRKH 286
>03_02_0829 -
11599665-11600364,11600853-11601076,11601786-11602000,
11602300-11602377,11602593-11603907
Length = 843
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 260 QCRRNACPSVGHSSSDQFEALQSPKS 183
Q RN PS+ H +SD F + SP S
Sbjct: 81 QKSRNLSPSISHQASDSFSPVPSPLS 106
>06_03_0049 +
15961706-15962017,15962952-15963851,15964769-15964913,
15964969-15965705
Length = 697
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = -1
Query: 751 NLWGGPIVDFICNDRTFCQCFLSSDTRKLMERCTF*ASSSGVMSTWPTATERHNTFFIWN 572
++W P + +C+D +C + + K++ERC + G S + T + F W
Sbjct: 37 HIWDEPYLYRVCSDGLLRRCVPTEEGLKIIERCHA-SPYGGHYSAFRTQAKIWQCGFFWP 95
Query: 571 LM 566
M
Sbjct: 96 TM 97
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,203,142
Number of Sequences: 37544
Number of extensions: 454415
Number of successful extensions: 1078
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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