Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_J23
(889 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 287 5e-77
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 286 6e-77
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 286 6e-77
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 286 6e-77
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 286 6e-77
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 284 3e-76
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 283 5e-76
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 6e-41
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 136 1e-31
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 118 4e-26
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 287 bits (703), Expect = 5e-77
Identities = 130/205 (63%), Positives = 157/205 (76%)
Frame = +2
Query: 215 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 394
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 395 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 574
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 575 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDED 754
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRCLMEEDED 217
Query: 755 SFKRQFSKYIKLGVTADAIEXSTRK 829
++K+QFS+YIK VT D +E +K
Sbjct: 218 AYKKQFSQYIKNSVTPDMMEEMYKK 242
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 103 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 210
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 286 bits (702), Expect = 6e-77
Identities = 130/205 (63%), Positives = 157/205 (76%)
Frame = +2
Query: 215 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 394
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 395 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 574
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 575 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDED 754
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 217
Query: 755 SFKRQFSKYIKLGVTADAIEXSTRK 829
++K+QFS+YIK VT D +E +K
Sbjct: 218 AYKKQFSQYIKNSVTPDMMEEMYKK 242
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 103 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 210
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 286 bits (702), Expect = 6e-77
Identities = 130/205 (63%), Positives = 157/205 (76%)
Frame = +2
Query: 215 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 394
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 395 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 574
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 575 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDED 754
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 217
Query: 755 SFKRQFSKYIKLGVTADAIEXSTRK 829
++K+QFS+YIK VT D +E +K
Sbjct: 218 AYKKQFSQYIKNSVTPDMMEEMYKK 242
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 103 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 210
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 286 bits (702), Expect = 6e-77
Identities = 130/205 (63%), Positives = 157/205 (76%)
Frame = +2
Query: 215 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 394
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 395 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 574
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 575 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDED 754
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 217
Query: 755 SFKRQFSKYIKLGVTADAIEXSTRK 829
++K+QFS+YIK VT D +E +K
Sbjct: 218 AYKKQFSQYIKNSVTPDMMEEMYKK 242
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 103 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 210
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 286 bits (702), Expect = 6e-77
Identities = 130/205 (63%), Positives = 157/205 (76%)
Frame = +2
Query: 215 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 394
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 395 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 574
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 575 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDED 754
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 217
Query: 755 SFKRQFSKYIKLGVTADAIEXSTRK 829
++K+QFS+YIK VT D +E +K
Sbjct: 218 AYKKQFSQYIKNSVTPDMMEEMYKK 242
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 103 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 210
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 284 bits (697), Expect = 3e-76
Identities = 129/205 (62%), Positives = 156/205 (76%)
Frame = +2
Query: 215 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 394
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAA 97
Query: 395 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 574
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 157
Query: 575 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDED 754
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED
Sbjct: 158 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 217
Query: 755 SFKRQFSKYIKLGVTADAIEXSTRK 829
++K+QFS+YIK VT D +E +K
Sbjct: 218 AYKKQFSQYIKNSVTPDMMEEMYKK 242
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 103 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 210
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 283 bits (695), Expect = 5e-76
Identities = 129/200 (64%), Positives = 154/200 (77%)
Frame = +2
Query: 215 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 394
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 45 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 104
Query: 395 AYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGA 574
AY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 105 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGN 164
Query: 575 RVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDED 754
+VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L ++DED
Sbjct: 165 KVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDED 224
Query: 755 SFKRQFSKYIKLGVTADAIE 814
++K+QFS+YIK VT D E
Sbjct: 225 AYKKQFSQYIKNSVTPDMEE 244
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 103 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 210
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 43
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (405), Expect = 6e-41
Identities = 76/125 (60%), Positives = 90/125 (72%)
Frame = +2
Query: 254 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 433
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 434 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 613
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 614 LNVPH 628
L++PH
Sbjct: 121 LSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 136 bits (328), Expect = 1e-31
Identities = 60/90 (66%), Positives = 76/90 (84%)
Frame = +2
Query: 560 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLE 739
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 740 QDDEDSFKRQFSKYIKLGVTADAIEXSTRK 829
++DED++K+QFS+YIK VT D +E +K
Sbjct: 61 EEDEDAYKKQFSQYIKNSVTPDMMEEMYKK 90
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 118 bits (283), Expect = 4e-26
Identities = 49/61 (80%), Positives = 59/61 (96%)
Frame = +2
Query: 215 VQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 394
+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 395 A 397
A
Sbjct: 98 A 98
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 103 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 210
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,477,004
Number of Sequences: 237096
Number of extensions: 2540763
Number of successful extensions: 4603
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4594
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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