Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_J14
(868 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0276 + 27378994-27380094,27380185-27380250,27380586-273806... 77 2e-14
12_02_0765 + 22980542-22980570,22980673-22980748,22981113-229812... 63 3e-10
07_01_0873 - 7257016-7257957,7260083-7260262 50 2e-06
03_06_0445 - 33982018-33982965,33984308-33984463 50 2e-06
03_01_0015 + 126611-126639,126718-127099 50 2e-06
03_02_0053 - 5289119-5289176,5289302-5289593,5289689-5289864,529... 48 1e-05
03_05_0889 + 28543106-28543354,28544379-28544465,28544548-285446... 36 0.032
03_03_0134 + 14732622-14732830,14733202-14733316,14733429-147336... 30 2.8
07_01_1045 + 9131301-9131483,9131652-9131717,9132433-9132513,913... 29 3.6
08_02_1370 + 26457276-26457482,26457600-26457721,26458240-264582... 29 6.4
03_01_0453 - 3471656-3471819,3472416-3472580,3473062-3473145,347... 29 6.4
>02_05_0276 +
27378994-27380094,27380185-27380250,27380586-27380660,
27381927-27382025,27382353-27382436,27382519-27382868,
27383190-27383406,27383579-27383658,27383760-27383850,
27386544-27386672,27388771-27388858,27389967-27390097
Length = 836
Score = 76.6 bits (180), Expect = 2e-14
Identities = 29/62 (46%), Positives = 41/62 (66%)
Frame = +2
Query: 374 KELDYIMGGAAAWENVDSTDAVCPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNW 553
KE++ I + A +N T CP+C G AY+ Q+Q RSADEPM+TFY+CC +C +W
Sbjct: 774 KEVEPIFSDSDAMKNAPKTTTTCPRCQNGEAYYRQMQIRSADEPMSTFYKCCREECQFDW 833
Query: 554 RD 559
R+
Sbjct: 834 RE 835
>12_02_0765 +
22980542-22980570,22980673-22980748,22981113-22981271,
22981370-22981450
Length = 114
Score = 62.9 bits (146), Expect = 3e-10
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
Frame = +2
Query: 230 SXMLFCPTCANMLMVEEG-PEAALRYACNTCPYVYNIKKKVSSRTFP--KLKELDYIMGG 400
S M FC C N+L +E + L YAC C + R E ++
Sbjct: 2 STMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQD 61
Query: 401 AAAWENVDSTDAV-CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWRD 559
A + T AV C CG+G A F Q R +E MT F+ CCN C H WR+
Sbjct: 62 VAGDPTLPRTKAVRCAVCGHGEAVFFQATARG-EEGMTLFFVCCNPSCGHRWRE 114
>07_01_0873 - 7257016-7257957,7260083-7260262
Length = 373
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +2
Query: 440 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 556
C +CG + + QLQTRSADEPMTTF C N C ++W+
Sbjct: 335 CGRCGQRKTTYYQLQTRSADEPMTTFVTCVN--CNNHWK 371
>03_06_0445 - 33982018-33982965,33984308-33984463
Length = 367
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +2
Query: 440 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWR 556
C +CG + + QLQTRSADEPMTTF C N C ++W+
Sbjct: 329 CGRCGQRKTTYYQLQTRSADEPMTTFVTCVN--CNNHWK 365
>03_01_0015 + 126611-126639,126718-127099
Length = 136
Score = 50.4 bits (115), Expect = 2e-06
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +2
Query: 440 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWRD 559
C CG+G A F Q R +E MT F+ CCN CAH WR+
Sbjct: 98 CAACGHGEAVFFQATARG-EEGMTLFFVCCNLTCAHRWRE 136
>03_02_0053 -
5289119-5289176,5289302-5289593,5289689-5289864,
5290272-5290493,5291261-5291337
Length = 274
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +3
Query: 729 GQVIAVPTDTIYGLACSANCPQAIKKLYCIXGEXQ 833
GQVIAVPTDTIYG AC A +A+ ++Y I G Q
Sbjct: 82 GQVIAVPTDTIYGFACDACSAEAVNRIYEIKGRVQ 116
>03_05_0889 +
28543106-28543354,28544379-28544465,28544548-28544604,
28544704-28544781
Length = 156
Score = 36.3 bits (80), Expect = 0.032
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2
Query: 440 CPKCGYGRAYFMQLQTRSADEPMTTFYRCCNHKCAHNWRD 559
C KC + Q RSADE T FY+C N C H + +
Sbjct: 117 CEKCKNPELQYYTKQLRSADEGQTVFYKCAN--CRHEFNE 154
>03_03_0134 +
14732622-14732830,14733202-14733316,14733429-14733632,
14733862-14733990,14734077-14734244,14734920-14735177,
14736051-14736096,14736574-14736601,14737206-14737295,
14738132-14738204,14738291-14738319,14738425-14738548,
14738741-14738851,14739082-14739182,14739263-14739365
Length = 595
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 287 EAALRYACNTCPYVYNIKKKVSSRTFPKLKELDYIMGGAAAWENVDSTDAVC 442
E +L+ C ++ + S F +L E+DY + W STDA+C
Sbjct: 211 EVSLQNVCEGHTLLFALDGSPSELLFERLPEIDY---DNSEWTEASSTDAIC 259
>07_01_1045 +
9131301-9131483,9131652-9131717,9132433-9132513,
9133414-9133482,9133581-9133643,9133933-9133941,
9134259-9134341,9134415-9134517
Length = 218
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 275 EEGPEAALRYACNTCPYVYNIKKKVSSRT 361
E P + + CN CP+V ++KK ++ T
Sbjct: 77 EGNPALLVMFVCNHCPFVKHLKKDIAKLT 105
>08_02_1370 +
26457276-26457482,26457600-26457721,26458240-26458293,
26458390-26458431,26458553-26458667,26458746-26458909,
26459280-26459349,26459897-26459995,26460277-26460354
Length = 316
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 729 GQVIAVPTDTIYGLACSANCPQAIKKLYCIXG 824
G V +PTDT+Y + C + ++++L I G
Sbjct: 100 GAVGIIPTDTVYSIVCDLSNNDSVERLRRIKG 131
>03_01_0453 -
3471656-3471819,3472416-3472580,3473062-3473145,
3473304-3473375,3473496-3473574,3473894-3473990,
3474064-3474116,3474257-3474386,3474464-3474498,
3476108-3476212,3476759-3476833,3477671-3477799,
3477918-3478097,3478737-3478820,3478943-3479059,
3479170-3479242,3479316-3479437,3479519-3479641,
3479917-3479989,3480218-3480396,3480699-3480837,
3481105-3481259,3481570-3481875
Length = 912
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 428 TDAVCPKCGYGRAYFMQLQTRSADEP 505
TD VCP C G Y +Q + R D P
Sbjct: 742 TDQVCPTCAPGPVYKIQFKFRRRDIP 767
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,203,739
Number of Sequences: 37544
Number of extensions: 322027
Number of successful extensions: 583
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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