Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_J13
         (927 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0664 + 4979892-4979931,4980040-4980236,4982340-4982723,498...    31   1.7  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   6.9  
06_03_1191 + 28286685-28287008,28287149-28287211,28287377-282874...    28   9.2  

>07_01_0664 +
           4979892-4979931,4980040-4980236,4982340-4982723,
           4983499-4983549,4983659-4983741,4983818-4983917,
           4984410-4984488,4984957-4985080,4985605-4985711,
           4985810-4985938,4987004-4987089,4987200-4987367,
           4987477-4987637,4987721-4987752,4987866-4988047,
           4988386-4988465,4988885-4988950,4989060-4989349,
           4990433-4990540,4991521-4991618,4991680-4991782,
           4992269-4992345,4992449-4992520,4992579-4992670,
           4992909-4992989,4993290-4993392,4994334-4994492,
           4994696-4995085
          Length = 1213

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = -2

Query: 491 GPXXAPPLXPXPXAXLXXQXXXPTPPPRTXXXKXGXXG 378
           GP   PP+   P A    Q   P PPPR      G  G
Sbjct: 19  GPYQGPPVMAPPHAQYQYQYAQPPPPPRQPGFLEGWYG 56


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 17/62 (27%), Positives = 18/62 (29%)
 Frame = +1

Query: 676  PXXPPPXXXTXXTXXPXSXXXXXPXPXXXXPXXXXPXXXPXXXPXXPXXXXXPGXPXXXX 855
            P  PPP      T  P +     P P    P        P   P  P     PG P    
Sbjct: 1161 PAPPPPAGFRGGTPPPNAHGGVAPPPPP--PRGHGGVGGPPTPPGAPAPPMPPGVPGGPP 1218

Query: 856  PP 861
            PP
Sbjct: 1219 PP 1220


>06_03_1191 +
           28286685-28287008,28287149-28287211,28287377-28287461,
           28287561-28287623,28287954-28288029,28288190-28288223,
           28289553-28289659,28289738-28289807,28289852-28289950
          Length = 306

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 477 PPPXPXPXGXLIXSXXXSHPSPPH 406
           PPP P P G  + +    H  PPH
Sbjct: 20  PPPPPPPPGTSLYASYRHHAYPPH 43


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,122,419
Number of Sequences: 37544
Number of extensions: 149832
Number of successful extensions: 429
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)