Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_J09
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526...    30   2.1  
03_05_0067 - 20460206-20460703,20461255-20461530                       29   6.5  
02_05_0936 - 32875479-32875573,32875794-32876028,32877752-328778...    29   6.5  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   6.5  

>08_01_0600 -
           5262573-5262773,5262850-5262952,5263050-5263180,
           5263263-5263312,5265266-5265725,5266349-5266708
          Length = 434

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -1

Query: 799 PPXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
           PP   G  P PP   +      P P  G PPP
Sbjct: 40  PPQMWGQAPPPPPQMWGQAPPPPQPAYGQPPP 71


>03_05_0067 - 20460206-20460703,20461255-20461530
          Length = 257

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -1

Query: 799 PPXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
           PP      P PP   +  GA  P    G PPP
Sbjct: 17  PPQYFQAGPPPPPPQYFQGAHPPAAMWGQPPP 48


>02_05_0936 -
           32875479-32875573,32875794-32876028,32877752-32877848,
           32878863-32878927,32879506-32879571,32879735-32879842,
           32880169-32880303,32880582-32880647,32881172-32881222,
           32881312-32881386,32881834-32881896,32882694-32882783,
           32882903-32883100,32883189-32883315,32883482-32884100,
           32884228-32884265,32884651-32884718,32885056-32885100,
           32885243-32885302,32885510-32885593,32885677-32885868,
           32887361-32887663
          Length = 959

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = -3

Query: 482 ILVPVLLNNVINKCPAIMLAVNRTAKVPGRIIFLMVSIITINGIKI*GVP 333
           +L+PVL N++++   A +  +N+T+ V  R++  +V     N IK   VP
Sbjct: 651 LLIPVLPNDMMDFLDAPVPYINKTSDVHSRLVNAVVIDANKNQIKSTSVP 700


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
 Frame = -1

Query: 841 PKXXPXXPXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPP--XXGXPPP 704
           PK  P  P      PP    G P PP          PPP    G PPP
Sbjct: 332 PKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPP 379



 Score = 28.3 bits (60), Expect = 8.6
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = -1

Query: 799 PPXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
           PP      P PP       A  PPP  G PPP
Sbjct: 318 PPKPAAAAPPPPPP--PKAAPPPPPPKGPPPP 347


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,053,770
Number of Sequences: 37544
Number of extensions: 211140
Number of successful extensions: 666
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)