Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_J09
(883 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.15
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.20
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 33 0.20
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.5
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 2.5
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 2.5
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 2.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.4
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 5.8
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -1
Query: 799 PPXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
PP GG P PP G PPP G PPP
Sbjct: 87 PPMFAGGIPPPPPMM--GGIPPPPPMFGAPPP 116
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 820 PXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
P F PP G PP F G PPP G PP
Sbjct: 68 PVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPP 106
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -2
Query: 807 FFSPPXXXGXXPXPXXXFL-XXGPXXPXXXGXPPPP 703
F PP G P P F P P G PPPP
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 799 PPXXXGGXPXPPXXFFXXGAXXPPP 725
PP GG P PP F GA PPP
Sbjct: 97 PPPMMGGIPPPPPMF---GAPPPPP 118
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 820 PXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPPXXGXPP 707
P FFPP G P PP F G PPP PP
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFM--GRGMPPPFMPPPP 325
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 820 PXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPPXXGXPP 707
P FFPP G P PP F G PPP PP
Sbjct: 290 PPPFGFFPPPPRGHFPPPPPHFM--GRGMPPPFMPPPP 325
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 841 PKXXPXXPXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
P P P PP G P PP PPP G PPP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPA----AGSPPPPRTGSPPP 274
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -1
Query: 856 GXXXXPKXXPXXPXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPPXXGXPP 707
G P+ P PP GG P PP PPP G PP
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR---AGSPPPPPPPRGSPP 308
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 799 PPXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
PP G P PP G+ PPP PPP
Sbjct: 256 PPPPAAGSPPPPRT----GSPPPPPTGSPPPP 283
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = -1
Query: 841 PKXXPXXPXKXXFFPPXXXGGXPXPPXXFFXX--GAXXPPPXXGXPPP 704
P P P PP G P PP G+ PP G PPP
Sbjct: 276 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 841 PKXXPXXPXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
P P P PP G P PP PPP G PPP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPA----AGSPPPPRTGSPPP 295
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -1
Query: 856 GXXXXPKXXPXXPXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPPXXGXPP 707
G P+ P PP GG P PP PPP G PP
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR---AGSPPPPPPPRGSPP 329
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 799 PPXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
PP G P PP G+ PPP PPP
Sbjct: 277 PPPPAAGSPPPPRT----GSPPPPPTGSPPPP 304
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = -1
Query: 841 PKXXPXXPXKXXFFPPXXXGGXPXPPXXFFXX--GAXXPPPXXGXPPP 704
P P P PP G P PP G+ PP G PPP
Sbjct: 297 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -1
Query: 841 PKXXPXXPXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
P P P PP G P PP PPP G PPP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPA----AGSPPPPRTGSPPP 280
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = -1
Query: 856 GXXXXPKXXPXXPXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPPXXGXPP 707
G P+ P PP GG P PP PPP G PP
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR---AGSPPPPPPPRGSPP 314
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -1
Query: 799 PPXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
PP G P PP G+ PPP PPP
Sbjct: 262 PPPPAAGSPPPPRT----GSPPPPPTGSPPPP 289
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Frame = -1
Query: 841 PKXXPXXPXKXXFFPPXXXGGXPXPPXXFFXX--GAXXPPPXXGXPPP 704
P P P PP G P PP G+ PP G PPP
Sbjct: 282 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -1
Query: 829 PXXPXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPPXXGXP 710
P P F PP G P PP G PPP P
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -1
Query: 829 PXXPXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPPXXGXP 710
P P F PP G P PP G PPP P
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -1
Query: 841 PKXXPXXPXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
P+ P P P G P PP GA PPP PPP
Sbjct: 212 PQAPPAPPPPIGGIAPVNAHGAPPPPP-LPPVGAGAPPPPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -1
Query: 841 PKXXPXXPXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
P+ P P P G P PP GA PPP PPP
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPP-LPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -1
Query: 841 PKXXPXXPXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
P+ P P P G P PP GA PPP PPP
Sbjct: 198 PQAPPAPPPPIGGIAPVNAHGAPPPPP-LPPVGAGAPPPPPPPPPP 242
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 796 PXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
P GG P PP G PPP G PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 796 PXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
P GG P PP G PPP G PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 737
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 796 PXXXGGXPXPPXXFFXXGAXXPPPXXGXPPP 704
P GG P PP G PPP G PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP 320
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/49 (28%), Positives = 16/49 (32%)
Frame = -1
Query: 856 GXXXXPKXXPXXPXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPPXXGXP 710
G P+ P P + PP G PP G PP G P
Sbjct: 157 GAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGPP 205
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/49 (28%), Positives = 16/49 (32%)
Frame = -1
Query: 856 GXXXXPKXXPXXPXKXXFFPPXXXGGXPXPPXXFFXXGAXXPPPXXGXP 710
G P+ P P + PP G PP G PP G P
Sbjct: 157 GAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGPP 205
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,051,298
Number of Sequences: 27780
Number of extensions: 179204
Number of successful extensions: 628
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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