Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_J07
         (859 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003550-1|AAH03550.2|  327|Homo sapiens chromosome 7 open readi...   210   4e-54
AF132954-1|AAD27729.1|  320|Homo sapiens CGI-20 protein protein.      207   5e-53

>BC003550-1|AAH03550.2|  327|Homo sapiens chromosome 7 open reading
           frame 20 protein.
          Length = 327

 Score =  210 bits (514), Expect = 4e-54
 Identities = 100/218 (45%), Positives = 140/218 (64%), Gaps = 1/218 (0%)
 Frame = +2

Query: 143 RGERGVVRVLDKLEASINSGQYYEAHQMYRTLYFRYLTQKKYPEXXXXXXXXXXXXXERD 322
           R   GV RV  KL AS+  G YYEAHQMYRTL+FRY++Q K+ E                
Sbjct: 18  RNRGGVQRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHTEARELMYSGALLFFSHG 77

Query: 323 QQGSGADLAILFVEALTKSETKPNEEWVSKLAKLFELISSSVPERETFLTNSIKWSM-DN 499
           QQ S ADL++L +E+L K+E +  +E +  LAK+F L+  + PER TF++ ++KWS   +
Sbjct: 78  QQNSAADLSMLVLESLEKAEVEVADELLENLAKVFSLMDPNSPERVTFVSRALKWSSGGS 137

Query: 500 NKKGDPLLHKKIAEVFWKEKKYTAAHRHFLHSSDGSAYANMLIELPTTKGLKSEIDLFIA 679
            K G P LH+ +A   WKE+ Y  +  HFLHS+DG   ANML+E  T++G +SE+D+F+A
Sbjct: 138 GKLGHPRLHQLLALTLWKEQNYCESRYHFLHSADGEGCANMLVEYSTSRGFRSEVDMFVA 197

Query: 680 QAVLQILCLRNVRMATETFLRYTETHPKIKNSKGPPYI 793
           QAVLQ LCL+N   A+  F  YT+ HP I++  GPP++
Sbjct: 198 QAVLQFLCLKNKSSASVVFTTYTQKHPSIED--GPPFV 233


>AF132954-1|AAD27729.1|  320|Homo sapiens CGI-20 protein protein.
          Length = 320

 Score =  207 bits (505), Expect = 5e-53
 Identities = 98/215 (45%), Positives = 139/215 (64%), Gaps = 1/215 (0%)
 Frame = +2

Query: 152 RGVVRVLDKLEASINSGQYYEAHQMYRTLYFRYLTQKKYPEXXXXXXXXXXXXXERDQQG 331
           R V RV  KL AS+  G YYEAHQMYRTL+FRY++Q K+ E                QQ 
Sbjct: 14  RAVQRVEGKLRASVEKGDYYEAHQMYRTLFFRYMSQSKHTEARELMYSGALLFFSHGQQN 73

Query: 332 SGADLAILFVEALTKSETKPNEEWVSKLAKLFELISSSVPERETFLTNSIKWSM-DNNKK 508
           S ADL++L +E+L K+E +  +E +  LAK+F L+  + PER TF++ ++KWS   + K 
Sbjct: 74  SAADLSMLVLESLEKAEVEVADELLENLAKVFSLMDPNSPERVTFVSRALKWSSGGSGKL 133

Query: 509 GDPLLHKKIAEVFWKEKKYTAAHRHFLHSSDGSAYANMLIELPTTKGLKSEIDLFIAQAV 688
           G P LH+ +A   WKE+ Y  +  HFLHS+DG   A+ML+E  T++G +SE+D+F+AQAV
Sbjct: 134 GHPRLHQLLALTLWKEQNYCESRYHFLHSADGEGCADMLVEYSTSRGFRSEVDMFVAQAV 193

Query: 689 LQILCLRNVRMATETFLRYTETHPKIKNSKGPPYI 793
           LQ LCL+N   A+  F  YT+ HP I++  GPP++
Sbjct: 194 LQFLCLKNKSSASVVFTTYTQKHPSIED--GPPFV 226


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,269,812
Number of Sequences: 237096
Number of extensions: 2413690
Number of successful extensions: 4466
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4461
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)