Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_J07
         (859 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12964-12|AAA91216.1|  362|Caenorhabditis elegans Hypothetical p...    48   6e-06
Z92829-9|CAB07349.1|  360|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z49067-3|CAA88852.3|  591|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z34799-8|CAA84319.3|  591|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AC006714-10|AAK29727.2|  253|Caenorhabditis elegans F-box a prot...    29   4.2  
Z69885-3|CAA93755.1|  278|Caenorhabditis elegans Hypothetical pr...    29   5.6  
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ...    29   5.6  
U97009-12|ABR92602.1|  532|Caenorhabditis elegans Udp-glucuronos...    28   7.4  
U97009-11|AAC69026.1|  533|Caenorhabditis elegans Udp-glucuronos...    28   7.4  
Z92830-8|CAB07353.1|  537|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>U12964-12|AAA91216.1|  362|Caenorhabditis elegans Hypothetical
           protein F26F4.1 protein.
          Length = 362

 Score = 48.4 bits (110), Expect = 6e-06
 Identities = 58/216 (26%), Positives = 83/216 (38%), Gaps = 24/216 (11%)
 Frame = +2

Query: 170 LDKLEASINSGQYYEAHQMYRTLYFRYLTQKKYPEXXXXXXXXXXXXXERDQQGSGA-DL 346
           L +L       ++Y+A Q YRT   R    K   E              R++Q   A D+
Sbjct: 6   LSRLSEFEKEKKFYDALQFYRTKVTRSFRLKNANEVAIPLVKHALEFFFREKQYQCAIDI 65

Query: 347 AILFVEALTKSETKPNEEW-------VSKLAKLFEL---ISSSVPE------RETFLTNS 478
              + E L+K+     EE        VSK A   E+     +S PE      R   +  +
Sbjct: 66  TTQYAECLSKNNVDLGEEAFNILADSVSKFANFAEIENEAGNSEPEQLLNTARCKCVDLA 125

Query: 479 IKWSMDN------NKKGDPLLHKKIAEVFWKEKKYTAAHRHFLHSSDGSAYANML-IELP 637
           I+W+          K G    H  +A+          A  HFL S D  ++AN L  E  
Sbjct: 126 IQWTKQKATTPIEKKYGSAAFHTVLAKKLVAVDHVELAKNHFLLSDDFKSFANFLHQEYE 185

Query: 638 TTKGLKSEIDLFIAQAVLQILCLRNVRMATETFLRY 745
           + K  +SE ++ I +AV Q LCL     A   F  Y
Sbjct: 186 SFKQKESEPEVIIVEAVFQSLCLDRFPFAVSLFTEY 221


>Z92829-9|CAB07349.1|  360|Caenorhabditis elegans Hypothetical
           protein F10A3.13 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 614 HMLNHPMSVKSVYEQLCTFFPSKILLLFSCVGVG 513
           + L   + +++++  L  FFP+  L+LF   GVG
Sbjct: 249 YQLFKTLLIQTIFPSLLVFFPAACLILFPAFGVG 282


>Z49067-3|CAA88852.3|  591|Caenorhabditis elegans Hypothetical
           protein C44F1.1 protein.
          Length = 591

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
 Frame = -1

Query: 859 HKLXYS-LCSTALSKTXKNSIVXYIWRSFAILYFG--MRFCIPQKCFSCHSYISQTKYLQ 689
           HKL  S  C    SKT K       +++   L+    + FC  QK  SC +Y+ +   + 
Sbjct: 316 HKLCPSPACEKKSSKTKKQMAASEDYQTVISLFNKGFLTFCSTQKTESCFNYVEKNSSML 375

Query: 688 HSLCYEQI 665
              C E I
Sbjct: 376 MRFCDENI 383


>Z34799-8|CAA84319.3|  591|Caenorhabditis elegans Hypothetical
           protein C44F1.1 protein.
          Length = 591

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
 Frame = -1

Query: 859 HKLXYS-LCSTALSKTXKNSIVXYIWRSFAILYFG--MRFCIPQKCFSCHSYISQTKYLQ 689
           HKL  S  C    SKT K       +++   L+    + FC  QK  SC +Y+ +   + 
Sbjct: 316 HKLCPSPACEKKSSKTKKQMAASEDYQTVISLFNKGFLTFCSTQKTESCFNYVEKNSSML 375

Query: 688 HSLCYEQI 665
              C E I
Sbjct: 376 MRFCDENI 383


>AC006714-10|AAK29727.2|  253|Caenorhabditis elegans F-box a protein
           protein 21 protein.
          Length = 253

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 530 KIAEVFWKEKKYTAAHRHFLHSSDGSAY 613
           +I  VFW E      H +F+HS D S++
Sbjct: 204 EIVRVFWPEYNGNYHHNNFIHSFDSSSF 231


>Z69885-3|CAA93755.1|  278|Caenorhabditis elegans Hypothetical
           protein T04C10.3 protein.
          Length = 278

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 17/69 (24%), Positives = 36/69 (52%)
 Frame = +2

Query: 356 FVEALTKSETKPNEEWVSKLAKLFELISSSVPERETFLTNSIKWSMDNNKKGDPLLHKKI 535
           F + L     K   E + +L + F+L+  ++    + L +S+K  ++ +KK   +L KK+
Sbjct: 174 FTDLLQDFFQKRRVEKLRQLVEEFDLVLITMGNIYSQLNDSMKSDLEASKKQKTILDKKL 233

Query: 536 AEVFWKEKK 562
           +++  K  K
Sbjct: 234 SDLLQKTTK 242


>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
           protein R155.3 protein.
          Length = 1165

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 486 HFIEFVRKVSRSGTLELINSNNFANFETHSSLGLV-SDFVKASTKSIARS 340
           H I+    V+ + TL L+  NN++  ET  +  +V S   K  T SIA S
Sbjct: 59  HLIKLKASVTYTQTLSLVKYNNYSQKETVKNSEVVYSSLQKVYTSSIALS 108


>U97009-12|ABR92602.1|  532|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein9, isoform b protein.
          Length = 532

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/62 (22%), Positives = 31/62 (50%)
 Frame = -2

Query: 567 VYFFSFQNTSAIFLCRSGSPFLLLSIDHFIEFVRKVSRSGTLELINSNNFANFETHSSLG 388
           +Y   F N +   LC+  + F+  +I H +   R + +   + + NSN++ +F   ++  
Sbjct: 209 LYRIFFWNLTTQRLCQFQNDFIQKAIGHPVPHWRDLVKESPIYITNSNSYLDFAVPTTAT 268

Query: 387 LV 382
           +V
Sbjct: 269 IV 270


>U97009-11|AAC69026.1|  533|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein9, isoform a protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/62 (22%), Positives = 31/62 (50%)
 Frame = -2

Query: 567 VYFFSFQNTSAIFLCRSGSPFLLLSIDHFIEFVRKVSRSGTLELINSNNFANFETHSSLG 388
           +Y   F N +   LC+  + F+  +I H +   R + +   + + NSN++ +F   ++  
Sbjct: 210 LYRIFFWNLTTQRLCQFQNDFIQKAIGHPVPHWRDLVKESPIYITNSNSYLDFAVPTTAT 269

Query: 387 LV 382
           +V
Sbjct: 270 IV 271


>Z92830-8|CAB07353.1|  537|Caenorhabditis elegans Hypothetical
           protein F11A5.9 protein.
          Length = 537

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -3

Query: 560 FFPSKILLLFSCVGVGHLFCCYPLTILL 477
           + PS+  LLFS V VG +   YP+ +L+
Sbjct: 104 YSPSEKSLLFSLVAVGAMVAVYPVMLLI 131


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,232,318
Number of Sequences: 27780
Number of extensions: 415737
Number of successful extensions: 1211
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)