Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_J06
         (923 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070674-1|AAL48145.1|  147|Drosophila melanogaster RH10862p pro...    87   2e-17
AE014296-832|AAF47889.1|  147|Drosophila melanogaster CG15016-PA...    87   2e-17

>AY070674-1|AAL48145.1|  147|Drosophila melanogaster RH10862p
           protein.
          Length = 147

 Score = 87.4 bits (207), Expect = 2e-17
 Identities = 38/84 (45%), Positives = 56/84 (66%)
 Frame = +1

Query: 163 MPTXXLALLLRNMPKPELKTSLKXXSHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKE 342
           MP+  LAL+LR +P+PEL + ++  + +I D GGIIR +ENLG R +P+K + HG+ H+E
Sbjct: 1   MPSYELALVLRQLPRPELISVIRRTAESILDKGGIIRKLENLGSRALPHKVSEHGVVHRE 60

Query: 343 ANYFIFKIDTPTKAVIDLKEEYKR 414
             +F    DT    + DLKEE+ R
Sbjct: 61  GTHFTIAFDTAPTKIADLKEEFGR 84



 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = +3

Query: 498 PPAYREDVQKMIQIGKTQVNRFTYKFKYNSGLDYYPFQK 614
           PPAYR+DVQ++I   + +  +   KF YNSGLDYYPFQK
Sbjct: 112 PPAYRKDVQEIIAAAQKKQKK---KFNYNSGLDYYPFQK 147



 Score = 34.3 bits (75), Expect = 0.24
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +2

Query: 398 KRNTKEDVDIVRQRFFKVKEEERKACTL 481
           K     D+DI+R+  FKV+E E+K CTL
Sbjct: 79  KEEFGRDIDIIRRYIFKVEEPEQKPCTL 106


>AE014296-832|AAF47889.1|  147|Drosophila melanogaster CG15016-PA
           protein.
          Length = 147

 Score = 87.4 bits (207), Expect = 2e-17
 Identities = 38/84 (45%), Positives = 56/84 (66%)
 Frame = +1

Query: 163 MPTXXLALLLRNMPKPELKTSLKXXSHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKE 342
           MP+  LAL+LR +P+PEL + ++  + +I D GGIIR +ENLG R +P+K + HG+ H+E
Sbjct: 1   MPSYELALVLRQLPRPELISVIRRTAESILDKGGIIRKLENLGSRALPHKVSEHGVVHRE 60

Query: 343 ANYFIFKIDTPTKAVIDLKEEYKR 414
             +F    DT    + DLKEE+ R
Sbjct: 61  GTHFTIAFDTAPTKIADLKEEFGR 84



 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 23/39 (58%), Positives = 29/39 (74%)
 Frame = +3

Query: 498 PPAYREDVQKMIQIGKTQVNRFTYKFKYNSGLDYYPFQK 614
           PPAYR+DVQ++I   + +  +   KF YNSGLDYYPFQK
Sbjct: 112 PPAYRKDVQEIIAAAQKKQKK---KFNYNSGLDYYPFQK 147



 Score = 34.3 bits (75), Expect = 0.24
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +2

Query: 398 KRNTKEDVDIVRQRFFKVKEEERKACTL 481
           K     D+DI+R+  FKV+E E+K CTL
Sbjct: 79  KEEFGRDIDIIRRYIFKVEEPEQKPCTL 106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,388,593
Number of Sequences: 53049
Number of extensions: 564906
Number of successful extensions: 959
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4546383066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)