Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_J06
         (923 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    25   1.3  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              23   5.2  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   5.2  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   9.0  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +3

Query: 243 CYIRLRRNHQKHRKFRISTNALQVHCTWYDPQRSQL 350
           C+ R  R+H      R+ T     HC+  D Q  Q+
Sbjct: 15  CHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQV 50


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +2

Query: 605 FPKVSRKMYCFFNCAIK*IEV*IAMEKK 688
           FP+   K+ C+FNC ++   V   M+KK
Sbjct: 62  FPE-DEKLKCYFNCVLEKFNV---MDKK 85


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 401 RNTKEDVDIVRQRFFKVKEEERKACTLEG 487
           RN KED +  RQR  K  + +     L+G
Sbjct: 481 RNNKEDSEEFRQRLRKELDSKTGGVNLKG 509


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +3

Query: 501 PAYREDVQKMIQ--IGKTQVNRFTYKFKYN 584
           PAYR +VQK I    G  + +   Y +++N
Sbjct: 102 PAYRAEVQKAISECKGIAKGDNCEYAYRFN 131


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,991
Number of Sequences: 438
Number of extensions: 3614
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)