Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_J05
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61953-11|AAC48074.1| 140|Caenorhabditis elegans Hypothetical p... 178 4e-45
Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical pr... 111 9e-25
Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical pr... 111 9e-25
Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical p... 111 9e-25
Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical pr... 111 9e-25
Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical pr... 111 9e-25
Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical pr... 111 9e-25
Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical pr... 111 9e-25
Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical pr... 111 9e-25
X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein... 111 9e-25
U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein... 111 9e-25
U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein... 111 9e-25
U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein... 111 9e-25
U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein... 111 9e-25
U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein... 111 9e-25
AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone prote... 111 9e-25
AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone prote... 111 9e-25
AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone prote... 111 9e-25
Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical p... 109 3e-24
Z68222-1|CAA92497.1| 145|Caenorhabditis elegans Hypothetical pr... 94 1e-19
AF040652-2|AAB95019.1| 221|Caenorhabditis elegans Hypothetical ... 33 0.28
AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical ... 29 4.5
Z81037-7|CAB02744.2| 431|Caenorhabditis elegans Hypothetical pr... 29 5.9
>U61953-11|AAC48074.1| 140|Caenorhabditis elegans Hypothetical
protein R08C7.3 protein.
Length = 140
Score = 178 bits (434), Expect = 4e-45
Identities = 87/98 (88%), Positives = 90/98 (91%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GRIHR LK RTTS GRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL
Sbjct: 30 FPVGRIHRFLKQRTTSSGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 89
Query: 358 QLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGGP 471
LAIRGDEELD+LIKATIAGGGVIPHIH+ L+ KKG P
Sbjct: 90 HLAIRGDEELDTLIKATIAGGGVIPHIHRYLMNKKGAP 127
>Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical
protein T10C6.12 protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical
protein H02I12.7 protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.10 protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.6 protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical
protein F54E12.5 protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical
protein F08G2.2 protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical
protein T23D8.6 protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical
protein B0035.7 protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein
protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein 7
protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein 19
protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein 21
protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein 61
protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein 30
protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone protein
33 protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone protein
53 protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone protein
51 protein.
Length = 127
Score = 111 bits (266), Expect = 9e-25
Identities = 59/98 (60%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKKGG 468
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK G
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTG 123
>Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical
protein C50F4.13 protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 58/96 (60%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GR+HR L+ + RVGA A VY AA+LEYL AEVLELAGNA++D K RI PRHL
Sbjct: 27 FPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHL 85
Query: 358 QLAIRGDEELDSLIK-ATIAGGGVIPHIHKSLIGKK 462
QLA+R DEEL+ L+ TIA GGV+P+I L+ KK
Sbjct: 86 QLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKK 121
>Z68222-1|CAA92497.1| 145|Caenorhabditis elegans Hypothetical
protein ZK1251.1 protein.
Length = 145
Score = 94.3 bits (224), Expect = 1e-19
Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Frame = +1
Query: 178 FPXGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHL 357
FP GRIHR L+ T R+ A A+V+ AA LEYLT E++E++ A+ + K R+TPRHL
Sbjct: 38 FPVGRIHRKLRETTRGKQRISAGASVFMAATLEYLTTELMEMSAIAANESKKSRVTPRHL 97
Query: 358 QLAIRGDEELDSLI-KATIAGGGVIP-HIHKSLIGKK 462
LAI GD+E L+ K T+ GGV P IH SL+ KK
Sbjct: 98 HLAIYGDQETAQLLDKVTLPQGGVTPMPIHPSLLPKK 134
>AF040652-2|AAB95019.1| 221|Caenorhabditis elegans Hypothetical
protein T05A8.2 protein.
Length = 221
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 464 PFFPMRDLCMCGMTPPPAIVAFMRLSNSSSPLIAS-CKCRG 345
P+FP +D+C G+T P V LSNS P+ S C G
Sbjct: 90 PWFPYQDVCWNGLTSIPQAVFQSELSNSHQPVPQSESSCSG 130
>AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical
protein C10E2.2 protein.
Length = 501
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 780 HCSHCTDLYLILTDCYTI*ALXRCNXLRH 866
HCSHC L I TDC + C+ L H
Sbjct: 8 HCSHCFSLNCISTDC-PVSKCKHCHTLLH 35
>Z81037-7|CAB02744.2| 431|Caenorhabditis elegans Hypothetical
protein C17E4.3 protein.
Length = 431
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 443 LCMCGMTPPPAIVAFMRLSNSSSPLIASCKCRGVIRFTFKS 321
+CMCG T P + + PLI+ CKC G + +S
Sbjct: 15 ICMCGETSIPYLG-----QQAGEPLISPCKCSGTMGLFHRS 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,496,325
Number of Sequences: 27780
Number of extensions: 339746
Number of successful extensions: 747
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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