Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_J04
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   4.8  
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699...    29   4.8  
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866...    29   6.3  
11_04_0460 - 17955102-17955146,17955253-17955310,17955442-179555...    28   8.4  

>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/45 (35%), Positives = 19/45 (42%)
 Frame = -2

Query: 748  PPIXWXTXXPPLSEVIPLPPXXRPXPXSX*XRKRKXAPXPNPLSP 614
            PP       PPLS  +P PP   P P        + AP P P+ P
Sbjct: 1164 PPPATPPPPPPLSPSLPPPPPPPPLPSGP---PPQPAPPPLPIQP 1205


>05_07_0200 -
           28368890-28369021,28369169-28369303,28369918-28369947,
           28370019-28370093,28370222-28370333,28370440-28370621,
           28370723-28370854,28372193-28373479
          Length = 694

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 721 PPLSEVIPLPPXXRPXPXSX*XRKRKXAPXPNPLS 617
           P LS++ P+PP   P P     R R  +P P+  S
Sbjct: 299 PELSKLPPIPPPPPPPPPPPMPRSRSASPSPSTSS 333


>09_06_0277 -
           21983049-21983080,21983250-21984788,21986619-21986655,
           21987612-21987665,21987781-21987893,21988272-21988660,
           21988783-21988903,21989245-21989342,21989963-21990153
          Length = 857

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = -2

Query: 757 LXXPPIXWXTXXPPLSEVIPLPPXXRPXPXSX*XRKRKXAPXPNP 623
           L  PP    +  PP S V PLPP   P P        + AP P+P
Sbjct: 409 LYYPPPPDISPSPPPS-VTPLPPVVYPSPPEVTPSPPEIAPYPSP 452


>11_04_0460 -
           17955102-17955146,17955253-17955310,17955442-17955593,
           17955888-17955993,17956101-17956222,17956766-17956834,
           17956969-17957214,17957331-17957373,17957449-17957520,
           17957954-17958066,17958158-17958238,17958343-17958415,
           17959413-17959519,17960410-17960514,17960684-17960974,
           17961621-17961707,17961774-17961842,17961917-17961973,
           17962057-17962155,17962223-17962312,17962395-17962511,
           17964164-17964244,17964353-17964502,17964812-17964956,
           17967359-17967510,17967647-17967784,17967838-17967914,
           17968032-17968134
          Length = 1015

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 748 PPIXWXTXXPPLSEVIPLPPXXRPXP 671
           PPI W    PP++   P+ P   P P
Sbjct: 499 PPIGWCVGAPPITLPAPIEPFLLPEP 524


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,795,263
Number of Sequences: 37544
Number of extensions: 167127
Number of successful extensions: 386
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)