Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_J04
         (863 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L07881-1|AAA28871.1|  248|Drosophila melanogaster ribosomal prot...    32   1.2  
L02075-1|AAB05985.1|  248|Drosophila melanogaster ribosomal prot...    32   1.2  
L02074-4|AAB05982.1|  248|Drosophila melanogaster ribosomal prot...    32   1.2  
L01658-1|AAC34306.1|  248|Drosophila melanogaster ribosomal prot...    32   1.2  
AY058620-1|AAL13849.1|  217|Drosophila melanogaster LD31286p pro...    32   1.2  
AE014298-1080|AAF46288.1|  217|Drosophila melanogaster CG10944-P...    32   1.2  
AE014298-1079|AAN09219.1|  251|Drosophila melanogaster CG10944-P...    32   1.2  
AE014298-1078|AAN09218.1|  248|Drosophila melanogaster CG10944-P...    32   1.2  
L02074-3|AAB05984.1|  200|Drosophila melanogaster protein ( Dros...    29   6.2  
L02074-2|AAB05983.1|  200|Drosophila melanogaster protein ( Dros...    29   6.2  
BT022735-1|AAY55151.1|  149|Drosophila melanogaster IP07614p pro...    29   6.2  
BT022511-1|AAY54927.1|  147|Drosophila melanogaster IP07914p pro...    29   6.2  
AE014298-1077|AAS65274.1|  135|Drosophila melanogaster CG33222-P...    29   6.2  
AE014298-1076|AAF46287.3|  135|Drosophila melanogaster CG11386-P...    29   6.2  

>L07881-1|AAA28871.1|  248|Drosophila melanogaster ribosomal protein
           S6 protein.
          Length = 248

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 105 SEAEYAKLLAQRKKESKA 158
           + A+YAKLL QRKKESKA
Sbjct: 206 ASADYAKLLVQRKKESKA 223


>L02075-1|AAB05985.1|  248|Drosophila melanogaster ribosomal protein
           S6 protein.
          Length = 248

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 105 SEAEYAKLLAQRKKESKA 158
           + A+YAKLL QRKKESKA
Sbjct: 206 ASADYAKLLVQRKKESKA 223


>L02074-4|AAB05982.1|  248|Drosophila melanogaster ribosomal protein
           S6 protein.
          Length = 248

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 105 SEAEYAKLLAQRKKESKA 158
           + A+YAKLL QRKKESKA
Sbjct: 206 ASADYAKLLVQRKKESKA 223


>L01658-1|AAC34306.1|  248|Drosophila melanogaster ribosomal protein
           S6 protein.
          Length = 248

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 105 SEAEYAKLLAQRKKESKA 158
           + A+YAKLL QRKKESKA
Sbjct: 206 ASADYAKLLVQRKKESKA 223


>AY058620-1|AAL13849.1|  217|Drosophila melanogaster LD31286p
           protein.
          Length = 217

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 105 SEAEYAKLLAQRKKESKA 158
           + A+YAKLL QRKKESKA
Sbjct: 175 ASADYAKLLVQRKKESKA 192


>AE014298-1080|AAF46288.1|  217|Drosophila melanogaster CG10944-PA,
           isoform A protein.
          Length = 217

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 105 SEAEYAKLLAQRKKESKA 158
           + A+YAKLL QRKKESKA
Sbjct: 175 ASADYAKLLVQRKKESKA 192


>AE014298-1079|AAN09219.1|  251|Drosophila melanogaster CG10944-PC,
           isoform C protein.
          Length = 251

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 105 SEAEYAKLLAQRKKESKA 158
           + A+YAKLL QRKKESKA
Sbjct: 209 ASADYAKLLVQRKKESKA 226


>AE014298-1078|AAN09218.1|  248|Drosophila melanogaster CG10944-PB,
           isoform B protein.
          Length = 248

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 105 SEAEYAKLLAQRKKESKA 158
           + A+YAKLL QRKKESKA
Sbjct: 206 ASADYAKLLVQRKKESKA 223


>L02074-3|AAB05984.1|  200|Drosophila melanogaster protein (
           Drosophila melanogasterribosomal protein S6 gene and two
           potential alternativelyspliced proteins, complete cds.
           ).
          Length = 200

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +3

Query: 111 AEYAKLLAQRKKESKA 158
           AEY KLL +RKKESKA
Sbjct: 165 AEYVKLLVKRKKESKA 180


>L02074-2|AAB05983.1|  200|Drosophila melanogaster protein (
           Drosophila melanogasterribosomal protein S6 gene and two
           potential alternativelyspliced proteins, complete cds.
           ).
          Length = 200

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +3

Query: 111 AEYAKLLAQRKKESKA 158
           AEY KLL +RKKESKA
Sbjct: 165 AEYVKLLVKRKKESKA 180


>BT022735-1|AAY55151.1|  149|Drosophila melanogaster IP07614p
           protein.
          Length = 149

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +3

Query: 111 AEYAKLLAQRKKESKA 158
           AEY KLL +RKKESKA
Sbjct: 114 AEYVKLLVKRKKESKA 129


>BT022511-1|AAY54927.1|  147|Drosophila melanogaster IP07914p
           protein.
          Length = 147

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +3

Query: 111 AEYAKLLAQRKKESKA 158
           AEY KLL +RKKESKA
Sbjct: 112 AEYVKLLVKRKKESKA 127


>AE014298-1077|AAS65274.1|  135|Drosophila melanogaster CG33222-PA
           protein.
          Length = 135

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +3

Query: 111 AEYAKLLAQRKKESKA 158
           AEY KLL +RKKESKA
Sbjct: 100 AEYVKLLVKRKKESKA 115


>AE014298-1076|AAF46287.3|  135|Drosophila melanogaster CG11386-PA
           protein.
          Length = 135

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +3

Query: 111 AEYAKLLAQRKKESKA 158
           AEY KLL +RKKESKA
Sbjct: 100 AEYVKLLVKRKKESKA 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,420,935
Number of Sequences: 53049
Number of extensions: 245079
Number of successful extensions: 390
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)