Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_J02
(881 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 35 0.013
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 33 0.041
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 32 0.12
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 30 0.38
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 29 0.88
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 29 0.88
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 29 1.2
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 29 1.2
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 28 2.0
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 27 2.7
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 2.7
SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1 |Schizosacchar... 27 4.7
SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces pombe... 26 6.2
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 26 6.2
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 26 6.2
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 26 6.2
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 26 8.2
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 26 8.2
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 35.1 bits (77), Expect = 0.013
Identities = 19/66 (28%), Positives = 38/66 (57%)
Frame = +1
Query: 109 MDLSKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAI 288
M+L P + D E ++LE D S+L+ L+R+N+++ +QLK + NI++
Sbjct: 618 MELDDPAPQPAKHSRVDRYEHPKVLEDN-DSTISSLESLKRENEELREQLKVEHEENISM 676
Query: 289 RQEMRE 306
++++ E
Sbjct: 677 QKQLSE 682
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 33.5 bits (73), Expect = 0.041
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Frame = +1
Query: 118 SKNIEPPEDDNNEDITEEYEL--LESTLDELNSALD----FLERKNDDI---HQQLKELL 270
S + E ED +N+++ EYE+ L++ LDEL+ LD L K D+I +Q++E
Sbjct: 267 SLSTEMEEDKSNKEVDYEYEIRQLQNRLDELSEELDVAQDLLTEKEDEIATLKRQIEEKE 326
Query: 271 QSNIAIRQE 297
S+ A E
Sbjct: 327 NSSSAFENE 335
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 31.9 bits (69), Expect = 0.12
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 148 NNEDITE-EYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVS 324
NNE + E E+L + +DELNS LE + + + L + ++++E + +S
Sbjct: 20 NNEGLDGIEQEILAAGIDELNSRTRLLENDIKVMKSEFQRLTHEKSTMLEKIKENQEKIS 79
Query: 325 NS 330
N+
Sbjct: 80 NN 81
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 30.3 bits (65), Expect = 0.38
Identities = 13/61 (21%), Positives = 33/61 (54%)
Frame = +1
Query: 166 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN*RNA 345
E+ + +++++E+ + L+ + + + Q+K LL+ N ++++ + D N NA
Sbjct: 308 EKLSIAQNSINEIQTQNRDLKLETEKLQDQIKALLERNQSLQEALETVKNDEKNLREMNA 367
Query: 346 N 348
N
Sbjct: 368 N 368
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 29.1 bits (62), Expect = 0.88
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = +1
Query: 106 KMDLSKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIA 285
K++L + D + TE+ + + + LER+ DD+ Q+L+E+
Sbjct: 87 KVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSLERERDDMEQKLEEMTDKYTK 146
Query: 286 IRQEMRE 306
++ E+ E
Sbjct: 147 VKAELDE 153
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 29.1 bits (62), Expect = 0.88
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 103 MKMDLSKNIEPPEDDNNEDITEEY----ELLESTLDELNSALDFLERKNDDIHQQLKEL 267
+++ LSK + P + +E + E ELL + N AL +++ND + +Q++EL
Sbjct: 407 LRVQLSKKVPMPAKNTDERVIETLQRSNELLRMDISMQNEALLLRKQENDRLVKQVEEL 465
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 28.7 bits (61), Expect = 1.2
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 100 KMKMDLSKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKEL-LQS 276
K + + + I PP NN+ T++ LLES N + L D++++ E ++S
Sbjct: 151 KNESNTASTIRPPWIGNNDHATDKENLLESDASSSNDSESELTDSADNMNESDSESEIES 210
Query: 277 NIAIRQEMREENKDVSNSN*RN 342
+ + + EN D N RN
Sbjct: 211 SDSDHDD--GENSDSKLDNLRN 230
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +1
Query: 154 EDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSN 327
+D EE+ L LD++ + + KN D+ +L++ N ++ + +NK + N
Sbjct: 701 KDFIEEHSKLTKQLDDIKNQFGIISSKNRDLLSELEKSKSLNNSL-AALESKNKKLEN 757
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +1
Query: 97 VKMKMDLSKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKE 264
++ ++ L +N + ++E L T ELNSALD +++ +IH +LKE
Sbjct: 1318 LRSEVTLLRNKVADHESIRSKLSEVEMKLVDTRKELNSALDSCKKREAEIH-RLKE 1372
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 148 NNEDITEEYELLESTLDELNSALDFLER-KNDDIHQQLK 261
NNE + E + L+ + E+ +++ K DD+H+QLK
Sbjct: 911 NNEGLVTEIKTLQDKIMEIGGIRYRIQKSKVDDLHEQLK 949
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/54 (25%), Positives = 32/54 (59%)
Frame = +1
Query: 166 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSN 327
++++L + +D+L D LE+ ++ ++ + L QSN + + + EE D++N
Sbjct: 1127 KQHDLCANFVDDLKEKSDALEQLTNEKNELIVSLEQSN-SNNEALVEERSDLAN 1179
>SPAC23C11.03 |||U3 snoRNP-associated protein Mpp1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 226 ERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN 333
+R+N Q +++L +SN+ + + E K SNSN
Sbjct: 550 KRRNSGTEQVVRQLSKSNVEVIGKGGERKKVASNSN 585
>SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 882
Score = 26.2 bits (55), Expect = 6.2
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 163 TEEYE-LLESTLDELNSALDFLERKNDDIHQQLKE 264
T+ YE L+ +LD +++ F+++ DDI + LKE
Sbjct: 844 TKLYERALQQSLDTISANSSFIDKSLDDITRWLKE 878
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 26.2 bits (55), Expect = 6.2
Identities = 17/82 (20%), Positives = 37/82 (45%)
Frame = +1
Query: 34 LEPKS*IKRLIKWHVIIQKMVVKMKMDLSKNIEPPEDDNNEDITEEYELLESTLDELNSA 213
LE K+ IK +K H +++ + E PE++ E++ E + ++E++
Sbjct: 186 LEEKT-IKDTVKKHSEFISYPIQLVVTREVEKEVPEEEETEEVKNEEDDKAPKIEEVDDE 244
Query: 214 LDFLERKNDDIHQQLKELLQSN 279
+ E+K + + E + N
Sbjct: 245 SEKKEKKTKKVKETTTETEELN 266
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 118 SKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERK 234
SK + DD + DI E+ + LES ++ L D L +K
Sbjct: 101 SKTHQKLSDDYSLDIAEKLKKLESHIEALRKVYDDLYKK 139
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 26.2 bits (55), Expect = 6.2
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 154 EDITEEYELLESTLDELNSALDFLERKN---DDIHQQLKELLQSNIAIRQEMRE 306
E TEE EL + +N+ FL+++N D + + EL + N A E+ +
Sbjct: 2 EKDTEELELENAVFGNINNFSSFLDKENETFDVMMNEAPELSEDNDAQEDELEK 55
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 25.8 bits (54), Expect = 8.2
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +1
Query: 166 EEYELLESTLDELNSALDF-LE--RKNDDIHQQLKELLQSNIA-IRQEMREENKDVSN 327
EEYE L S D+LNS L F L+ +N + Q K+ L S + + +++ ++ VS+
Sbjct: 381 EEYEGLRSEADKLNSNLLFKLQTLNRNIKVTSQSKDSLTSIVGDLESKIKSLHESVSS 438
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 160 ITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIA-IRQEMREENKDVSNSN* 336
+ EE E L+ +++ N+ L ++ + LK+ + A ++QE+ +NK++++ N
Sbjct: 1392 LNEEVENLKKEVEQANTKNTRLAAAWNEKCENLKKSSLTRFAHLKQELTNKNKELTSKNA 1451
Query: 337 RN 342
N
Sbjct: 1452 EN 1453
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,352,623
Number of Sequences: 5004
Number of extensions: 42348
Number of successful extensions: 164
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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