Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_J02
(881 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0531 + 18256597-18256836,18257637-18257735,18258038-182581... 35 0.099
05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818 33 0.40
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 32 0.53
07_01_0463 + 3502708-3503535 31 1.2
01_06_1141 + 34845834-34845931,34846110-34846198,34846535-348466... 30 2.1
01_01_0287 - 2371323-2371482,2371582-2371988,2372526-2372552,237... 30 2.1
01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437... 30 2.8
04_01_0308 + 4188726-4190351 29 3.7
08_01_0626 - 5445676-5446687,5447099-5447430 29 4.9
07_01_0278 + 2039873-2039896,2040342-2040407,2040842-2040903,204... 29 4.9
05_04_0300 - 19969066-19969535,19971216-19972686 29 4.9
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 29 4.9
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 28 8.6
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472... 28 8.6
>08_02_0531 +
18256597-18256836,18257637-18257735,18258038-18258184,
18258295-18258427,18258521-18258585,18258792-18258962,
18259095-18259199,18259495-18259602,18259792-18260088,
18260191-18260256,18260477-18260679,18261178-18261232,
18261318-18261503,18261701-18261985
Length = 719
Score = 34.7 bits (76), Expect = 0.099
Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +1
Query: 82 IQKMVVKMKMDLSKNIEPPEDDNN--EDITEEYELLESTLDELNSALDFLERKNDDIHQQ 255
++ + ++K LS N E + ED + ELL+ L+ELN + + + +++H +
Sbjct: 180 LENEIKQLKKQLSDNSEKETETKRRLEDEHKRNELLQQQLNELNVSKERISTNMEELHNE 239
Query: 256 LKELLQSNIAIRQEM-REENKDVSNSN 333
L E +++++ R E + VS+++
Sbjct: 240 LSEKEAKLRRLQEDLSRREKEHVSDAS 266
>05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818
Length = 743
Score = 32.7 bits (71), Expect = 0.40
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Frame = +1
Query: 79 IIQKMVVKMKMDLSKNIEPPE--DDNNEDITEEYELLESTLDELNSALDFLERK-NDDIH 249
++QK K+ + ++ + E +D N+++ + Y+ LES DEL ERK N ++
Sbjct: 510 VLQKTQEKLDVTSNQLVSTMEAREDLNKELLDAYKKLESATDEL-----VRERKINATLN 564
Query: 250 QQLKELLQSNIA---IRQEMREENKDVSNS 330
++L+ L++ +I RQ ++ + +V+NS
Sbjct: 565 RELEALVEQSIVESEARQALQADLDEVTNS 594
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 32.3 bits (70), Expect = 0.53
Identities = 18/78 (23%), Positives = 40/78 (51%)
Frame = +1
Query: 85 QKMVVKMKMDLSKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKE 264
QK+ +K++MD S+++ D E + + L+ +DE S + L+ + + + Q E
Sbjct: 832 QKVELKLQMDESRSLITNLKDELEQVEAQKVELKLQMDESRSLITNLKDELEQVEAQKVE 891
Query: 265 LLQSNIAIRQEMREENKD 318
L ++ + + + E +D
Sbjct: 892 LKENQLESHRRLSEVQED 909
>07_01_0463 + 3502708-3503535
Length = 275
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = +1
Query: 121 KNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNI 282
K + +D +++ T + L++ L+++++ + L+ K +DI +QLKE L+ +
Sbjct: 168 KKEKKKKDKGDKEKTNDPAKLKAKLEKIDTKIQDLQAKKEDILRQLKEQLKEEL 221
>01_06_1141 +
34845834-34845931,34846110-34846198,34846535-34846686,
34847473-34847583,34847702-34847818,34847989-34848156,
34848563-34848703
Length = 291
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 130 EPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREE 309
E P D + + + E+LE L + + DFL+R QQL+EL N R++ +
Sbjct: 221 ELPADVIDTRLAQAQEILEDLLKPVEESQDFLKR------QQLRELAVLNSTYREDSPHQ 274
Query: 310 NKDVS 324
N S
Sbjct: 275 NGSAS 279
>01_01_0287 -
2371323-2371482,2371582-2371988,2372526-2372552,
2372854-2373066
Length = 268
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 109 MDLSKNIEPPEDDNNEDITEEYELLESTLDELNSALD-FLE 228
+D ++PPEDDNNE I +E + + L AL+ +LE
Sbjct: 191 IDTLSLMQPPEDDNNEMIADEGPDFDDLDESLQKALNKYLE 231
>01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,
4378900-4378970,4379038-4379144,4379241-4379711,
4379791-4379976,4380132-4380425,4380820-4381434,
4382219-4382615,4382768-4382850,4383397-4383567,
4384046-4384243,4384754-4385314,4385401-4385460,
4385553-4385869,4385980-4386403,4386539-4387006,
4387093-4387209,4387306-4387427,4387506-4388247,
4388453-4388485,4388625-4388879,4388975-4389160,
4390115-4390453,4391293-4392045
Length = 3017
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Frame = +1
Query: 103 MKMDLSKNIEPPEDDNNEDITEEYELLESTLDEL------NSALDFLERKNDDIHQQLKE 264
+++ L + E +D + +E +E+ S + +L A+ LER DDI L++
Sbjct: 875 LQLQLLRQRESFSNDPEDVFSEVHEIGRSIIYDLLMKGETGLAVATLERLGDDIESDLRQ 934
Query: 265 LLQSNI--AIRQEMREENK 315
L+Q + +R+++ EE K
Sbjct: 935 LMQGTVRRLLRRQIAEEMK 953
>04_01_0308 + 4188726-4190351
Length = 541
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = +1
Query: 142 DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMR 303
DD+ E + E E L+ L+E++ DF++ +N+ + + + + I E++
Sbjct: 95 DDDKEKMKMESEYLKRRLEEIHDNKDFMKTENNKLQSEALIVEKKQIMFEAEIK 148
>08_01_0626 - 5445676-5446687,5447099-5447430
Length = 447
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +1
Query: 121 KNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEM 300
+ IE ED+NN+D EE E+ E DE D E KND + ++ E + E
Sbjct: 232 EEIEEDEDENNDDDDEEEEMEE---DE-----DLDEDKNDVVEEEEDEDMDEGEDDENET 283
Query: 301 REE 309
EE
Sbjct: 284 NEE 286
>07_01_0278 +
2039873-2039896,2040342-2040407,2040842-2040903,
2042839-2043067,2043787-2044014,2044177-2044469,
2044594-2044909
Length = 405
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +1
Query: 175 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQ 294
+L + LD+L ++ L K+D++HQ L+++ + IR+
Sbjct: 114 KLSKGQLDDLTIMMETLRVKDDELHQLLQDIRARDATIRE 153
>05_04_0300 - 19969066-19969535,19971216-19972686
Length = 646
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +1
Query: 154 EDITEEYELLESTLDELNSALDFLERKNDDIHQQL 258
E++ E+ + + S +++LNS + F+ +N + QQL
Sbjct: 198 EELEEKVKSMHSVINDLNSRISFVVAENATLRQQL 232
>01_06_0124 -
26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/54 (22%), Positives = 29/54 (53%)
Frame = +1
Query: 166 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSN 327
E+ +++ +EL A L+ + + +Q E + S + + ++ E+N+ +SN
Sbjct: 754 EQISVMQKNNEELELANSNLQNELAMVQEQKNEAVASTVELGNKLEEQNQQISN 807
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +1
Query: 100 KMKMDLSKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKEL---L 270
K L++ E + + E++ +E ++TL +L + D ++ ++ Q +EL +
Sbjct: 1074 KNNCTLTEQFEVIKIELQEEVKMAHEEKDATLTQLEKSEDSIKNLESELAQLKEELSVQM 1133
Query: 271 QSNIAIRQEMREENKDVSN 327
+SN ++ +++ E VSN
Sbjct: 1134 ESNSSLNKQLEEAILKVSN 1152
>10_08_0558 +
18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 28.3 bits (60), Expect = 8.6
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 7/53 (13%)
Frame = +1
Query: 187 STLDELNSALDFLERKNDDIHQQLKELLQSN----IAIR--QEMREE-NKDVS 324
S ++EL L + N D+H QL+++ +SN +A++ EM E+ NK++S
Sbjct: 421 SQIEELKQELGHEKNLNGDLHLQLQKMQESNSELLLAVKDLDEMLEQKNKEIS 473
>06_03_0092 + 16546204-16546693,16546958-16547028,16547145-16547221,
16547322-16547469,16550080-16550148,16550348-16550509,
16550625-16550785,16551240-16551324,16552068-16552144,
16552234-16552441,16555844-16555921,16556463-16556591,
16556665-16556808,16556893-16557038,16557137-16557293,
16557391-16557449,16557582-16557741,16557849-16557998,
16558093-16558229,16558325-16558471,16558556-16558657,
16558742-16558799,16558895-16558996,16559729-16559766,
16559868-16559994,16560075-16560245,16560334-16560465,
16560577-16560686,16560866-16560926,16561031-16561208,
16561293-16561498,16561590-16561709,16561903-16562001,
16562152-16562370,16562701-16562840,16563175-16563286,
16563375-16563425,16563509-16563589,16563683-16563853,
16563934-16564089,16564174-16564380,16565145-16565215,
16565315-16565414,16565783-16565839,16566156-16566212,
16566308-16566388,16566467-16566606,16566641-16566764
Length = 2041
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/48 (27%), Positives = 30/48 (62%)
Frame = +1
Query: 163 TEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMRE 306
TE+ + L + ++EL ++L +++ DD+ ++ E Q+N +++M E
Sbjct: 1512 TEKVDSLTAEVEELKTSLQSEKQRADDLEKKRSEEQQANEEKQKKMEE 1559
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,959,152
Number of Sequences: 37544
Number of extensions: 214370
Number of successful extensions: 702
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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