Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP07_F_J02
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 38 0.013
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 34 0.12
AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical ... 34 0.12
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 1.1
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 31 1.1
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 31 1.1
M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein. 31 1.1
AF014939-5|AAB63928.2| 302|Caenorhabditis elegans Hypothetical ... 31 1.1
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 30 1.9
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 30 1.9
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 30 1.9
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 29 3.3
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 29 4.4
AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical ... 29 4.4
U40029-8|AAA81128.2| 275|Caenorhabditis elegans Hypothetical pr... 29 5.8
U97191-7|AAB52429.1| 241|Caenorhabditis elegans Hypothetical pr... 28 7.7
L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with... 28 7.7
L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with... 28 7.7
AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical ... 28 7.7
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical
protein C50C3.2 protein.
Length = 2107
Score = 37.5 bits (83), Expect = 0.013
Identities = 20/77 (25%), Positives = 41/77 (53%)
Frame = +1
Query: 85 QKMVVKMKMDLSKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKE 264
QK V+ L + E PED N EDI +E +++ S ++ +E D++ Q+ ++
Sbjct: 402 QKAVILASF-LQNHEESPEDMNAEDIEKEIRVIDGITVRCTSVVEQIENIEDELRQKPEQ 460
Query: 265 LLQSNIAIRQEMREENK 315
L Q ++ +++ + N+
Sbjct: 461 LNQLSVYASKQVNDLNE 477
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 34.3 bits (75), Expect = 0.12
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +1
Query: 115 LSKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQ 294
L ++I+ ED N + + LESTLDEL L+ +R D +Q ++ ++ + I Q
Sbjct: 1016 LLEDIQAEEDKVNH-LNKTKAKLESTLDELEDTLEREKRGRQDCEKQRRK-VEGELKIAQ 1073
Query: 295 EMREE 309
E+ EE
Sbjct: 1074 ELIEE 1078
>AC084155-5|AAK84606.1| 433|Caenorhabditis elegans Hypothetical
protein Y45G5AM.7 protein.
Length = 433
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/47 (31%), Positives = 33/47 (70%)
Frame = +1
Query: 106 KMDLSKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDI 246
++DL++N+E +++N+ ++T + E LE T+D+L+ + LE N ++
Sbjct: 147 ELDLARNVEILQEENS-NLTAKNEKLEETVDDLHEKVANLETSNKEL 192
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +1
Query: 157 DITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN 333
D+ E+L+ L + + LE DD+H+++ L SN + + + + +SNS+
Sbjct: 149 DLARNVEILQEENSNLTAKNEKLEETVDDLHEKVANLETSNKELTEINVDNERKISNSS 207
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 112 DLSKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKEL 267
DLS ++ + DN + T+ ++ ++ DEL LD R+N + Q++K+L
Sbjct: 1475 DLSSELDAAQRDNRQLSTDLFKA-KTANDELAEYLDSTRRENKSLAQEVKDL 1525
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/63 (20%), Positives = 34/63 (53%)
Frame = +1
Query: 76 VIIQKMVVKMKMDLSKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQ 255
++ +K + + ++ K ++ NE + + LES L ++ L+ ++ +N+D+ +Q
Sbjct: 893 LVEEKNALFLSLETEKANLADAEERNEKLNQLKATLESKLSDITGQLEDMQERNEDLARQ 952
Query: 256 LKE 264
K+
Sbjct: 953 KKK 955
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 181 LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 315
LE+ ++EL ALD + N+D + ++ L ++Q + EE K
Sbjct: 1634 LEADINELEIALDHANKANEDAQKNIRRYLDQIRELQQTVDEEQK 1678
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 181 LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 315
LE+ ++EL ALD + N+D + ++ L ++Q + EE K
Sbjct: 1634 LEADINELEIALDHANKANEDAQKNIRRYLDQIRELQQTVDEEQK 1678
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +1
Query: 112 DLSKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKEL 267
DLS ++ + DN + T+ ++ ++ DEL LD R+N + Q++K+L
Sbjct: 1475 DLSSELDAAQRDNRQLSTDLFKA-KTANDELAEYLDSTRRENKSLAQEVKDL 1525
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/63 (20%), Positives = 34/63 (53%)
Frame = +1
Query: 76 VIIQKMVVKMKMDLSKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQ 255
++ +K + + ++ K ++ NE + + LES L ++ L+ ++ +N+D+ +Q
Sbjct: 893 LVEEKNALFLSLETEKANLADAEERNEKLNQLKATLESKLSDITGQLEDMQERNEDLARQ 952
Query: 256 LKE 264
K+
Sbjct: 953 KKK 955
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 181 LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 315
LE+ ++EL ALD + N+D + ++ L ++Q + EE K
Sbjct: 1634 LEADINELEIALDHANKANEDAQKNIRRYLDQIRELQQTVDEEQK 1678
>M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein.
Length = 273
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 181 LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 315
LE+ ++EL ALD + N+D + ++ L ++Q + EE K
Sbjct: 134 LEADINELEIALDHANKANEDAQKNIRRYLDQIRELQQTVDEEQK 178
>AF014939-5|AAB63928.2| 302|Caenorhabditis elegans Hypothetical
protein ZC132.6 protein.
Length = 302
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 154 EDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMRE 306
E + +Y EST++ LN L + KND I Q KEL ++ + I ++R+
Sbjct: 144 EALKNKYTNSESTINSLNEKLLKEKSKNDSIQAQ-KELYENLVIIIDQLRQ 193
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +1
Query: 115 LSKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQ 294
L ++++ ED N + +L E TLD+L +L+ +R D+ +Q K ++ + I Q
Sbjct: 1015 LMEDLQSEEDKGNHQNKVKAKL-EQTLDDLEDSLEREKRARADLDKQ-KRKVEGELKIAQ 1072
Query: 295 EMREEN 312
E +E+
Sbjct: 1073 ENIDES 1078
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +1
Query: 115 LSKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQ 294
L ++++ ED N + +L E TLD+L +L+ +R D+ +Q K ++ + I Q
Sbjct: 1015 LMEDLQSEEDKGNHQNKVKAKL-EQTLDDLEDSLEREKRARADLDKQ-KRKVEGELKIAQ 1072
Query: 295 EMREEN 312
E +E+
Sbjct: 1073 ENIDES 1078
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +1
Query: 115 LSKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQ 294
L ++++ ED N + +L E TLD+L +L+ +R D+ +Q K ++ + I Q
Sbjct: 1018 LMEDLQSEEDKGNHQNKVKAKL-EQTLDDLEDSLEREKRARADLDKQ-KRKVEGELKIAQ 1075
Query: 295 EMREEN 312
E +E+
Sbjct: 1076 ENIDES 1081
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +1
Query: 181 LESTLDELNSALDFLERKNDD---IHQQLKELLQSNIAIRQEMREENKDV 321
+E D+LN A D L++ +DD + ++ K+LL S QE+R E D+
Sbjct: 125 IEVFTDQLNLARDKLQQADDDFVTLGKKYKKLLGSTRKSAQELRSEKIDM 174
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical protein
C08H9.2 protein.
Length = 1220
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 94 VVKMKMDLSKNIEPPEDDNNEDI--TEEYELLESTLDELNSALDFLERKNDD 243
V K+ D NI P+D+++EDI T + E ++ L+ L L E + +D
Sbjct: 950 VRKLMQDYDVNISIPKDNSSEDITVTGQTENVDQALEALRGKLGEYEAQAED 1001
>AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical
protein Y48G1A.4 protein.
Length = 813
Score = 29.1 bits (62), Expect = 4.4
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 79 IIQKMVVKMKMDLSKNIE-PPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQ 255
+I + V+ L KN++ E D++ED+ +E E LD+L D LE +DD Q
Sbjct: 307 LIDEDTVEKSRILKKNLDGSDESDDDEDLEDE----EEDLDDLLEDEDELEEDSDDEEAQ 362
>U40029-8|AAA81128.2| 275|Caenorhabditis elegans Hypothetical
protein F10G7.3 protein.
Length = 275
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 130 EPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDD 243
E +DD E EE +L ES + L +ALD E+K D
Sbjct: 191 EEEDDDEMEANAEEVDLNESFNERLANALDGAEQKGAD 228
>U97191-7|AAB52429.1| 241|Caenorhabditis elegans Hypothetical
protein F53F10.1 protein.
Length = 241
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 127 IEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQS 276
+E + D NE++ E E L+ +ELN + +E I Q L+ +QS
Sbjct: 176 VETTKSDINEELKAENEFLKDQANELNKCREKIETDGKTI-QDLRLRIQS 224
>L23651-7|AAM22042.1| 926|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
b protein.
Length = 926
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +1
Query: 118 SKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKE 264
S++ + +DD ++D E +++++ +L A+D ++R + D + +E
Sbjct: 769 SEDADLDDDDEDDDEEAEIQIIDNGESQLKLAMDRIDRLDIDFESRFQE 817
>L23651-6|AAK84496.3| 960|Caenorhabditis elegans Associated with
ran (nuclear import/export) function protein 2, isoform
a protein.
Length = 960
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +1
Query: 118 SKNIEPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKE 264
S++ + +DD ++D E +++++ +L A+D ++R + D + +E
Sbjct: 806 SEDADLDDDDEDDDEEAEIQIIDNGESQLKLAMDRIDRLDIDFESRFQE 854
>AL031632-2|CAA21005.2| 789|Caenorhabditis elegans Hypothetical
protein Y32B12B.2 protein.
Length = 789
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 145 DNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVS 324
D ED + ES DEL+ LER++D H++ ++ + I E EE D
Sbjct: 627 DEEEDYDNTEIVYESEEDELDGLEAKLERESDRRHKKWEKKNKVMIDSDDEEEEEENDDD 686
Query: 325 NSN 333
N
Sbjct: 687 KEN 689
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,280,597
Number of Sequences: 27780
Number of extensions: 246838
Number of successful extensions: 1126
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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